RNA id: TU149436



Basic Information


Item Value
RNA id TU149436
length 222
lncRNA type inter_gene
GC content 0.30
exon number 2
gene id G110978
representative False

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 813465 ~ 822698 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gatagaatggttatatagggtatttatcacgttaaaggggtgatagaatgattatatagggtatttatcacattaaaggggtgatagaatgattatatagggtatttatcacgttaaaggggtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatata

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU149435 lncRNA downstream 1448 811446 ~ 812017 (-) True G110977
TU149407 lncRNA downstream 5125 806262 ~ 808340 (-) True G110958
TU149419 lncRNA downstream 16876 755921 ~ 796589 (-) False G110964
TU149394 lncRNA downstream 45894 677818 ~ 767571 (-) True G110946
TU149420 lncRNA downstream 56827 755921 ~ 756638 (-) True G110964
TU149656 lncRNA upstream 27363 850061 ~ 880917 (-) False G111128
TU149657 lncRNA upstream 27363 850061 ~ 897711 (-) False G111128
TU149658 lncRNA upstream 27363 850061 ~ 880917 (-) True G111128
TU149681 lncRNA upstream 105225 927923 ~ 986063 (-) True G111137
TU149693 lncRNA upstream 157426 980124 ~ 980460 (-) True G111147
XM_039816419.1 mRNA downstream 135731 676331 ~ 677734 (-) True LOC120568738
XM_039817006.1 mRNA downstream 174569 632687 ~ 638896 (-) False inhbab
XM_039817005.1 mRNA downstream 174694 632687 ~ 638771 (-) False inhbab
XM_039817007.1 mRNA downstream 174789 632687 ~ 638676 (-) True inhbab
XM_039815532.1 mRNA downstream 190335 593907 ~ 623130 (-) True amph
XM_039816947.1 mRNA upstream 354 823052 ~ 839766 (-) True bfsp2
XM_039816949.1 mRNA upstream 835 823533 ~ 839766 (-) False bfsp2
XM_039816971.1 mRNA upstream 21110 843808 ~ 848645 (-) True ccr9a
XM_039814840.1 mRNA upstream 72809 895507 ~ 901196 (-) True LOC120567797
XM_039815035.1 mRNA upstream 228199 1050897 ~ 1053660 (-) False LOC120567934
TU149406 other downstream 47165 754263 ~ 766300 (-) True G110957
TU149268 other downstream 430800 375712 ~ 382665 (-) True G110889
TU149269 other downstream 431849 375712 ~ 381616 (-) False G110889
TU149279 other downstream 525125 266959 ~ 288340 (-) False adhfe1
TU149470 other upstream 26484 849182 ~ 849492 (-) True G110988
TU149680 other upstream 182373 1005071 ~ 1005925 (-) True G111136
TU149674 other upstream 186196 1008894 ~ 1010100 (-) True G111134
TU149667 other upstream 190121 1012819 ~ 1021435 (-) False G111133
TU149672 other upstream 197765 1020463 ~ 1092725 (-) True G111133

Expression Profile