Item | Value |
---|---|
RNA id | TU149632 |
length | 329 |
lncRNA type | sense_over |
GC content | 0.39 |
exon number | 2 |
gene id | LOC120568494 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_053122.1 |
NCBI id | CM020919.1 |
chromosome length | 39550354 |
location | 1451874 ~ 1683286 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU149623 | lncRNA | upstream | 35309 | 1411929 ~ 1416565 (+) | True | G111101 |
TU149613 | lncRNA | upstream | 60200 | 1391280 ~ 1391674 (+) | True | G111096 |
TU149610 | lncRNA | upstream | 66377 | 1385204 ~ 1385497 (+) | True | G111093 |
TU149609 | lncRNA | upstream | 67705 | 1383940 ~ 1384169 (+) | True | G111092 |
TU149591 | lncRNA | upstream | 220299 | 1230809 ~ 1231575 (+) | True | G111074 |
TU149847 | lncRNA | downstream | 33377 | 1709322 ~ 1926604 (+) | False | LOC120567896 |
XR_005640629.1 | lncRNA | downstream | 90550 | 1766495 ~ 1767066 (+) | True | LOC120567895 |
XR_005640628.1 | lncRNA | downstream | 170551 | 1846496 ~ 1853159 (+) | True | LOC120567894 |
TU149889 | lncRNA | downstream | 287763 | 1963708 ~ 1963929 (+) | True | G111296 |
TU149890 | lncRNA | downstream | 292462 | 1968407 ~ 1968625 (+) | True | G111297 |
XM_039816703.1 | mRNA | upstream | 109523 | 1322214 ~ 1342351 (+) | False | si:ch1073-184j22.1 |
XM_039817012.1 | mRNA | upstream | 164075 | 1226050 ~ 1287799 (+) | True | pex5lb |
XM_039815564.1 | mRNA | upstream | 237398 | 1208168 ~ 1214476 (+) | True | si:ch1073-184j22.2 |
XM_039816050.1 | mRNA | upstream | 251293 | 1152120 ~ 1200581 (+) | True | wdr33 |
XM_039816047.1 | mRNA | upstream | 359111 | 1070547 ~ 1092763 (+) | True | cdyl |
XM_039816058.1 | mRNA | downstream | 213178 | 1889123 ~ 1890298 (+) | True | LOC120568500 |
XM_039816059.1 | mRNA | downstream | 222110 | 1898055 ~ 1906798 (+) | True | LOC120568501 |
XM_039814970.1 | mRNA | downstream | 248206 | 1924151 ~ 1935777 (+) | True | LOC120567896 |
XM_039816079.1 | mRNA | downstream | 330855 | 2006800 ~ 2008880 (+) | False | LOC120568507 |
XM_039816087.1 | mRNA | downstream | 478990 | 2154935 ~ 2158565 (+) | True | LOC120568513 |
unassigned_transcript_479 | other | upstream | 7209 | 1444163 ~ 1444665 (+) | True | LOC120567879 |
TU149630 | other | upstream | 10727 | 1440653 ~ 1441147 (+) | True | G111106 |
TU149588 | other | upstream | 109577 | 1322242 ~ 1342297 (+) | True | si:ch1073-184j22.1 |
TU149593 | other | upstream | 115683 | 1242649 ~ 1336191 (+) | True | G111076 |
TU149501 | other | upstream | 359149 | 1080473 ~ 1092725 (+) | False | cdyl |
unassigned_transcript_492 | other | downstream | 45514 | 1721459 ~ 1722291 (+) | True | LOC120568495 |
unassigned_transcript_499 | other | downstream | 181214 | 1857159 ~ 1857661 (+) | True | LOC120567893 |
unassigned_transcript_500 | other | downstream | 194240 | 1870185 ~ 1870674 (+) | True | LOC120567891 |
unassigned_transcript_501 | other | downstream | 203793 | 1879738 ~ 1880285 (+) | True | LOC120567888 |
TU149900 | other | downstream | 332399 | 2008344 ~ 2015872 (+) | True | LOC120568507 |