RNA id: TU149676


Basic Information

Item Value
RNA id TU149676
length 526
lncRNA type sense_over
GC content 0.49
exon number 3
gene id G111135
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1006083 ~ 1115960 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtttgtgtgtctgtgtgtgtgtctgtgtgtgtgtgttgtgtgtgtctgtgtgtgttgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtcgtgtgtgtgtgttttttgtttgtgtgtctgtgtgtgtgtctgtgtgtgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtctgtgtgtgtgtgtctgtgtgtctgtgtgtgtgagtctgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtctgtgtgtgtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU149681 lncRNA downstream 20020 927923 ~ 986063 (-) True G111137
TU149693 lncRNA downstream 25623 980124 ~ 980460 (-) True G111147
TU149657 lncRNA downstream 108372 850061 ~ 897711 (-) False G111128
TU149656 lncRNA downstream 125166 850061 ~ 880917 (-) False G111128
TU149658 lncRNA downstream 125166 850061 ~ 880917 (-) True G111128
TU149712 lncRNA upstream 19713 1089100 ~ 1167159 (-) False G111156
TU149708 lncRNA upstream 19808 1089195 ~ 1165478 (-) False G111156
TU149733 lncRNA upstream 24059 1093446 ~ 1094637 (-) True G111172
TU149734 lncRNA upstream 24059 1093446 ~ 1094891 (-) False G111172
TU149736 lncRNA upstream 24059 1093446 ~ 1094891 (-) False G111172
XM_039814840.1 mRNA downstream 104887 895507 ~ 901196 (-) True LOC120567797
XM_039816971.1 mRNA downstream 157438 843808 ~ 848645 (-) True ccr9a
XM_039816947.1 mRNA downstream 166317 823052 ~ 839766 (-) True bfsp2
XM_039816949.1 mRNA downstream 166317 823533 ~ 839766 (-) False bfsp2
XM_039816419.1 mRNA downstream 328349 676331 ~ 677734 (-) True LOC120568738
XM_039816048.1 mRNA upstream 30677 1100064 ~ 1114180 (-) True LOC120568485
XM_039816343.1 mRNA upstream 50984 1120371 ~ 1136551 (-) False LOC120568681
XM_039816341.1 mRNA upstream 50984 1120371 ~ 1136543 (-) False LOC120568681
XM_039816342.1 mRNA upstream 50984 1120371 ~ 1136543 (-) False LOC120568681
XM_039816344.1 mRNA upstream 50984 1120371 ~ 1136543 (-) True LOC120568681
TU149680 other downstream 158 1005071 ~ 1005925 (-) True G111136
TU149470 other downstream 156591 849182 ~ 849492 (-) True G110988
TU149406 other downstream 239783 754263 ~ 766300 (-) True G110957
TU149268 other downstream 623418 375712 ~ 382665 (-) True G110889
TU149269 other downstream 624467 375712 ~ 381616 (-) False G110889
TU149740 other upstream 30697 1100084 ~ 1114182 (-) False LOC120568485
TU149799 other upstream 238152 1307539 ~ 1314727 (-) False mfn1a
TU149800 other upstream 238152 1307539 ~ 1314727 (-) True mfn1a
TU149801 other upstream 238152 1307539 ~ 1314727 (-) False mfn1a
TU149819 other upstream 316741 1386128 ~ 1390487 (-) False dhx9

Expression Profile