RNA id: TU149679


Basic Information

Item Value
RNA id TU149679
length 266
lncRNA type read_through
GC content 0.52
exon number 3
gene id G111135
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1006083 ~ 1115960 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtctgtgtgtgtctgtctgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgagagtctgagtgggtgggggggtgg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU149681 lncRNA downstream 30719 927923 ~ 986063 (-) True G111137
TU149693 lncRNA downstream 36322 980124 ~ 980460 (-) True G111147
TU149657 lncRNA downstream 119071 850061 ~ 897711 (-) False G111128
TU149656 lncRNA downstream 135865 850061 ~ 880917 (-) False G111128
TU149658 lncRNA downstream 135865 850061 ~ 880917 (-) True G111128
TU149704 lncRNA upstream 19633 1135593 ~ 1198926 (-) True G111156
TU149705 lncRNA upstream 19633 1135593 ~ 1165478 (-) False G111156
TU149745 lncRNA upstream 25082 1141042 ~ 1201437 (-) True G111176
TU149748 lncRNA upstream 36174 1152134 ~ 1154135 (-) False G111177
TU149747 lncRNA upstream 36760 1152720 ~ 1154135 (-) True G111177
XM_039814840.1 mRNA downstream 115586 895507 ~ 901196 (-) True LOC120567797
XM_039816971.1 mRNA downstream 168137 843808 ~ 848645 (-) True ccr9a
XM_039816947.1 mRNA downstream 177016 823052 ~ 839766 (-) True bfsp2
XM_039816949.1 mRNA downstream 177016 823533 ~ 839766 (-) False bfsp2
XM_039816419.1 mRNA downstream 339048 676331 ~ 677734 (-) True LOC120568738
XM_039816343.1 mRNA upstream 4411 1120371 ~ 1136551 (-) False LOC120568681
XM_039816341.1 mRNA upstream 4411 1120371 ~ 1136543 (-) False LOC120568681
XM_039816342.1 mRNA upstream 4411 1120371 ~ 1136543 (-) False LOC120568681
XM_039816344.1 mRNA upstream 4411 1120371 ~ 1136543 (-) True LOC120568681
XM_039816345.1 mRNA upstream 4411 1120371 ~ 1136497 (-) False LOC120568681
TU149674 other downstream 6682 1008894 ~ 1010100 (-) True G111134
TU149680 other downstream 10857 1005071 ~ 1005925 (-) True G111136
TU149470 other downstream 167290 849182 ~ 849492 (-) True G110988
TU149406 other downstream 250482 754263 ~ 766300 (-) True G110957
TU149268 other downstream 634117 375712 ~ 382665 (-) True G110889
TU149799 other upstream 191579 1307539 ~ 1314727 (-) False mfn1a
TU149800 other upstream 191579 1307539 ~ 1314727 (-) True mfn1a
TU149801 other upstream 191579 1307539 ~ 1314727 (-) False mfn1a
TU149819 other upstream 270168 1386128 ~ 1390487 (-) False dhx9
TU149785 other upstream 275848 1391808 ~ 1394202 (-) True LOC120568022

Expression Profile