Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU149846 |
| length | 271 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G111255 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 1688292 ~ 1688562 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0043254 | regulation of protein-containing complex assembly | biological_process |
| GO:0044087 | regulation of cellular component biogenesis | biological_process |
| GO:0008154 | actin polymerization or depolymerization | biological_process |
| GO:1902903 | regulation of supramolecular fiber organization | biological_process |
| GO:0032956 | regulation of actin cytoskeleton organization | biological_process |
| GO:0007015 | actin filament organization | biological_process |
| GO:0032970 | regulation of actin filament-based process | biological_process |
| GO:0051258 | protein polymerization | biological_process |
| GO:0097435 | supramolecular fiber organization | biological_process |
| GO:0030832 | regulation of actin filament length | biological_process |
| GO:0030833 | regulation of actin filament polymerization | biological_process |
| GO:0030041 | actin filament polymerization | biological_process |
| GO:0110053 | regulation of actin filament organization | biological_process |
| GO:0008064 | regulation of actin polymerization or depolymerization | biological_process |
| GO:0032535 | regulation of cellular component size | biological_process |
| GO:0032271 | regulation of protein polymerization | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU149836 | lncRNA | downstream | 24249 | 1549781 ~ 1664043 (-) | True | G111245 |
| TU149845 | lncRNA | downstream | 27884 | 1647173 ~ 1660408 (-) | True | G111254 |
| XR_005640627.1 | lncRNA | downstream | 162187 | 1524674 ~ 1526105 (-) | True | LOC120567885 |
| TU149826 | lncRNA | downstream | 179409 | 1471099 ~ 1508883 (-) | True | G111235 |
| XR_005640626.1 | lncRNA | downstream | 190325 | 1497762 ~ 1497967 (-) | True | LOC120567884 |
| TU149866 | lncRNA | upstream | 49671 | 1738233 ~ 1738676 (-) | True | G111275 |
| TU149869 | lncRNA | upstream | 64399 | 1752961 ~ 1841038 (-) | False | G111277 |
| TU149873 | lncRNA | upstream | 112698 | 1801260 ~ 1801637 (-) | True | G111281 |
| TU149868 | lncRNA | upstream | 152239 | 1840801 ~ 1841038 (-) | True | G111277 |
| TU149876 | lncRNA | upstream | 162138 | 1850700 ~ 1907994 (-) | True | G111283 |
| XM_039814966.1 | mRNA | downstream | 253017 | 1433235 ~ 1435275 (-) | True | LOC120567872 |
| XM_039815198.1 | mRNA | downstream | 259978 | 1415156 ~ 1428314 (-) | True | LOC120568025 |
| XM_039815197.1 | mRNA | downstream | 278764 | 1394003 ~ 1409528 (-) | False | LOC120568022 |
| XM_039816052.1 | mRNA | downstream | 297754 | 1353022 ~ 1390538 (-) | True | dhx9 |
| XM_039816051.1 | mRNA | downstream | 373447 | 1296833 ~ 1314845 (-) | False | mfn1a |
| XM_039816057.1 | mRNA | upstream | 68059 | 1756621 ~ 1764145 (-) | True | LOC120568497 |
| XM_039814972.1 | mRNA | upstream | 652900 | 2341462 ~ 2405093 (-) | False | LOC120567903 |
| XM_039816091.1 | mRNA | upstream | 830289 | 2518851 ~ 2601477 (-) | True | lamc1 |
| XM_039816622.1 | mRNA | upstream | 937276 | 2625838 ~ 2662765 (-) | False | smg7 |
| XM_039816623.1 | mRNA | upstream | 937276 | 2625838 ~ 2662765 (-) | False | smg7 |
| TU149817 | other | downstream | 270333 | 1412956 ~ 1417959 (-) | True | G111226 |
| TU149785 | other | downstream | 294090 | 1391808 ~ 1394202 (-) | True | LOC120568022 |
| TU149819 | other | downstream | 297805 | 1386128 ~ 1390487 (-) | False | dhx9 |
| TU149800 | other | downstream | 373565 | 1307539 ~ 1314727 (-) | True | mfn1a |
| unassigned_transcript_493 | other | upstream | 54738 | 1743300 ~ 1743839 (-) | True | LOC120567890 |
| unassigned_transcript_494 | other | upstream | 99005 | 1787567 ~ 1788061 (-) | True | LOC120567892 |
| unassigned_transcript_495 | other | upstream | 107960 | 1796522 ~ 1798678 (-) | True | LOC120568498 |
| unassigned_transcript_496 | other | upstream | 132188 | 1820750 ~ 1821550 (-) | True | LOC120567887 |
| unassigned_transcript_497 | other | upstream | 143619 | 1832181 ~ 1833095 (-) | True | LOC120568499 |
