RNA id: TU149999


Basic Information

Item Value
RNA id TU149999
length 214
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G111389
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2501893 ~ 2554775 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacacacacgcacgcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacagacacacacacacacacacacacagacacacacacacacacacagacacacacacacacacacacacacacacacacacagaaacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005640813.1 lncRNA upstream 27108 2473964 ~ 2474785 (+) True LOC120568944
TU149976 lncRNA upstream 66414 2415364 ~ 2435479 (+) True G111370
TU149978 lncRNA upstream 86577 2414102 ~ 2415316 (+) True G111371
TU149970 lncRNA upstream 162474 2338391 ~ 2339419 (+) True G111368
TU149957 lncRNA upstream 241477 2260139 ~ 2260416 (+) True G111357
TU150012 lncRNA downstream 616 2555391 ~ 2556012 (+) True G111401
TU150028 lncRNA downstream 10360 2565135 ~ 2625329 (+) False G111404
TU150032 lncRNA downstream 10911 2565686 ~ 2618703 (+) False G111404
TU150023 lncRNA downstream 11092 2565867 ~ 2667938 (+) False G111404
TU150022 lncRNA downstream 16401 2571176 ~ 2636043 (+) False G111404
XM_039816090.1 mRNA upstream 37053 2463673 ~ 2464840 (+) True LOC120568517
XM_039816088.1 mRNA upstream 264333 2234821 ~ 2237560 (+) True LOC120568514
XM_039816087.1 mRNA upstream 343328 2154935 ~ 2158565 (+) True LOC120568513
XM_039816079.1 mRNA upstream 493013 2006800 ~ 2008880 (+) False LOC120568507
XM_039814970.1 mRNA upstream 566116 1924151 ~ 1935777 (+) True LOC120567896
XM_039816589.1 mRNA downstream 111049 2665824 ~ 2689216 (+) True nmnat2
XM_039816549.1 mRNA downstream 177831 2732606 ~ 2733898 (+) True LOC120568826
XM_039816548.1 mRNA downstream 195079 2749854 ~ 2751572 (+) True LOC120568825
XM_039816303.1 mRNA downstream 233004 2787779 ~ 2826854 (+) True rasal2
XM_039815924.1 mRNA downstream 744089 3298864 ~ 3304226 (+) True ptmab
unassigned_transcript_508 other upstream 61550 2439709 ~ 2440343 (+) True LOC120568516
TU149991 other upstream 61695 2439736 ~ 2440198 (+) False LOC120568516
unassigned_transcript_507 other upstream 202013 2282608 ~ 2299880 (+) True LOC120568515
TU149958 other upstream 229966 2271639 ~ 2271927 (+) True G111358
unassigned_transcript_506 other upstream 280002 2221448 ~ 2221891 (+) True LOC120567899
TU150017 other downstream 17413 2572188 ~ 2636043 (+) True G111404
TU149996 other downstream 22346 2577121 ~ 2577931 (+) True G111388
TU150031 other downstream 60802 2615577 ~ 2636043 (+) False G111404
TU150110 other downstream 262169 2816944 ~ 2824588 (+) True G111452
TU150157 other downstream 383374 2938149 ~ 2940848 (+) True G111486

Expression Profile