RNA id: TU150032


Basic Information

Item Value
RNA id TU150032
length 250
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G111404
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2565135 ~ 2667938 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tctctgtgtgtgtgtctctgtgtgtgtctgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtgtgtgtgtgtgtgtatgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150012 lncRNA upstream 9674 2555391 ~ 2556012 (+) True G111401
TU149999 lncRNA upstream 10911 2501893 ~ 2554775 (+) True G111389
TU150002 lncRNA upstream 46230 2514154 ~ 2519456 (+) True G111392
XR_005640813.1 lncRNA upstream 90901 2473964 ~ 2474785 (+) True LOC120568944
TU149976 lncRNA upstream 130207 2415364 ~ 2435479 (+) True G111370
TU150060 lncRNA downstream 36170 2654873 ~ 2655433 (+) True G111428
TU150064 lncRNA downstream 42525 2661228 ~ 2808845 (+) False G111431
TU150065 lncRNA downstream 42525 2661228 ~ 2808845 (+) True G111431
TU150063 lncRNA downstream 42675 2661378 ~ 2808845 (+) False G111431
TU150113 lncRNA downstream 118913 2737616 ~ 2742300 (+) True G111455
XM_039816090.1 mRNA upstream 100846 2463673 ~ 2464840 (+) True LOC120568517
XM_039816088.1 mRNA upstream 328126 2234821 ~ 2237560 (+) True LOC120568514
XM_039816087.1 mRNA upstream 407121 2154935 ~ 2158565 (+) True LOC120568513
XM_039816079.1 mRNA upstream 556806 2006800 ~ 2008880 (+) False LOC120568507
XM_039814970.1 mRNA upstream 629909 1924151 ~ 1935777 (+) True LOC120567896
XM_039816589.1 mRNA downstream 47121 2665824 ~ 2689216 (+) True nmnat2
XM_039816549.1 mRNA downstream 113903 2732606 ~ 2733898 (+) True LOC120568826
XM_039816548.1 mRNA downstream 131151 2749854 ~ 2751572 (+) True LOC120568825
XM_039816303.1 mRNA downstream 169076 2787779 ~ 2826854 (+) True rasal2
XM_039815924.1 mRNA downstream 680161 3298864 ~ 3304226 (+) True ptmab
unassigned_transcript_508 other upstream 125343 2439709 ~ 2440343 (+) True LOC120568516
TU149991 other upstream 125488 2439736 ~ 2440198 (+) False LOC120568516
unassigned_transcript_507 other upstream 265806 2282608 ~ 2299880 (+) True LOC120568515
TU149958 other upstream 293759 2271639 ~ 2271927 (+) True G111358
unassigned_transcript_506 other upstream 343795 2221448 ~ 2221891 (+) True LOC120567899
TU150110 other downstream 198241 2816944 ~ 2824588 (+) True G111452
TU150157 other downstream 319446 2938149 ~ 2940848 (+) True G111486
TU150165 other downstream 398255 3016958 ~ 3075901 (+) True G111494
TU150153 other downstream 401890 3020593 ~ 3021258 (+) True G111484
TU150236 other downstream 769391 3388094 ~ 3399183 (+) False LOC120567769

Expression Profile