RNA id: TU150095


Basic Information

Item Value
RNA id TU150095
length 748
lncRNA type inter_gene
GC content 0.40
exon number 3
gene id G111448
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2843703 ~ 2889240 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tattcatCATGTAAACCTTCAGTTTGTGCTCACATCCCATCAGTAAAGTCTGATTTTTGTTTAAATCTCAGCTATGATAAGGACAATGATTAATCTTATTGATCATCAGGATGCACAGATACATGTGATTATGGAtttctttacaaattacaaagtATAGAGGATAAAGGAGATCTGGTGATTTCTCTCTTATACCCATGATGTGGAAGagaaacaacaacatacaaatacatcgatacaaatattcatCAAACATTTAGAGAGCAGAGAAGTTTTCATTCTCAGTTCAGGTCAACAAACATCATCATGAGCAGTGATAGCCTCCGTGGCTAAACAGACACAGGAAGGAGTCACCTAAAgaaactcaaacatttacacaacaaCTAATGACCAGATGCCAAAGGACATCCCATAAtgtttgactgacagctgatCTCTGTGCAGTGAAGAAATGTCACAACAATCAGCTCTCAGCAACAAACATGAAGACTAAATAAGTTGAAGAGTTAAAACAGAGattaacccttaaatgacttcCGTCTACTTCAGCTCACACAACTCAGCAGTGGTTCCAGAATAATCAAGACTAAAACCAGCATAgagcggctgagtgaatgtggtctggactctgtggaggagagtcatggtttcagagacgctgtagaaggacagaatacctgcactgtgatccaggtacactcctactctggaggactcaggACCTGAGACGGGAGTTTTGACTTTGttg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150066 lncRNA upstream 34858 2806185 ~ 2808845 (+) False G111431
TU150067 lncRNA upstream 34858 2806261 ~ 2808845 (+) False G111431
XR_005640741.1 lncRNA upstream 45097 2797088 ~ 2798606 (+) True LOC120568650
XR_005640740.1 lncRNA upstream 45097 2797088 ~ 2798606 (+) False LOC120568650
TU150124 lncRNA upstream 49718 2793584 ~ 2793985 (+) True G111464
TU150129 lncRNA downstream 12556 2891158 ~ 2891458 (+) True G111469
TU150131 lncRNA downstream 18722 2897324 ~ 2897840 (+) True G111471
TU150135 lncRNA downstream 31947 2910549 ~ 2923202 (+) True G111475
TU150137 lncRNA downstream 31947 2910549 ~ 2931445 (+) False G111475
TU150143 lncRNA downstream 35856 2914458 ~ 2930622 (+) True G111478
XM_039816303.1 mRNA upstream 16849 2787779 ~ 2826854 (+) True rasal2
XM_039816548.1 mRNA upstream 92131 2749854 ~ 2751572 (+) True LOC120568825
XM_039816549.1 mRNA upstream 109805 2732606 ~ 2733898 (+) True LOC120568826
XM_039816589.1 mRNA upstream 154487 2665824 ~ 2689216 (+) True nmnat2
XM_039816090.1 mRNA upstream 378863 2463673 ~ 2464840 (+) True LOC120568517
XM_039815924.1 mRNA downstream 420262 3298864 ~ 3304226 (+) True ptmab
XM_039814780.1 mRNA downstream 509452 3388054 ~ 3398106 (+) True LOC120567769
XM_039815755.1 mRNA downstream 612987 3491589 ~ 3506128 (+) True LOC120568331
XM_039815754.1 mRNA downstream 633027 3511629 ~ 3525115 (+) False LOC120568327
XM_039816094.1 mRNA downstream 662385 3540987 ~ 3552017 (+) True LOC120568521
TU150110 other upstream 19115 2816944 ~ 2824588 (+) True G111452
TU150017 other upstream 207660 2572188 ~ 2636043 (+) True G111404
TU150031 other upstream 207660 2615577 ~ 2636043 (+) False G111404
TU149996 other upstream 265772 2577121 ~ 2577931 (+) True G111388
TU149991 other upstream 403505 2439736 ~ 2440198 (+) False LOC120568516
TU150157 other downstream 59547 2938149 ~ 2940848 (+) True G111486
TU150165 other downstream 138356 3016958 ~ 3075901 (+) True G111494
TU150153 other downstream 141991 3020593 ~ 3021258 (+) True G111484
TU150236 other downstream 509492 3388094 ~ 3399183 (+) False LOC120567769
TU150599 other downstream 622077 3500679 ~ 3525049 (+) False LOC120568327

Expression Profile