RNA id: TU150150


Basic Information

Item Value
RNA id TU150150
length 362
lncRNA type inter_gene
GC content 0.47
exon number 3
gene id G111484
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2931639 ~ 3066029 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctgtctctgtgtgtgtgtgtgtgtttgtgtctctgtgtgtgcgtctttgtgtgtgtgtgtttgtgtgctgtgtatgtgtctccgtgtgtgtgtatgtttgtgtgtgtgtgtgtgtgtatgtttgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtctccgtgtgtgtgtgtgtctgtgtgtgtgtgtttgtgtttctgtgtgtgtgtgtgtgtgtgtgtgtttgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtatgtctgtgtgtgtgtgtgtctgtgtgtgtgtctttgtgtatgtctgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150158 lncRNA upstream 65484 2952608 ~ 2955109 (+) True G111487
TU150141 lncRNA upstream 72108 2942775 ~ 2948485 (+) True G111476
TU150138 lncRNA upstream 73716 2942775 ~ 2946877 (+) False G111476
TU150137 lncRNA upstream 89148 2910549 ~ 2931445 (+) False G111475
TU150175 lncRNA downstream 4537 3070566 ~ 3145702 (+) True G111501
TU150155 lncRNA downstream 16883 3082912 ~ 3098747 (+) False G111485
TU150183 lncRNA downstream 33366 3099395 ~ 3107381 (+) True G111506
TU150185 lncRNA downstream 47908 3113937 ~ 3114442 (+) True G111508
TU150190 lncRNA downstream 51655 3117684 ~ 3118187 (+) True G111512
XM_039816303.1 mRNA upstream 193739 2787779 ~ 2826854 (+) True rasal2
XM_039816548.1 mRNA upstream 269021 2749854 ~ 2751572 (+) True LOC120568825
XM_039816549.1 mRNA upstream 286695 2732606 ~ 2733898 (+) True LOC120568826
XM_039816589.1 mRNA upstream 331377 2665824 ~ 2689216 (+) True nmnat2
XM_039816090.1 mRNA upstream 555753 2463673 ~ 2464840 (+) True LOC120568517
XM_039815924.1 mRNA downstream 232835 3298864 ~ 3304226 (+) True ptmab
XM_039814780.1 mRNA downstream 322025 3388054 ~ 3398106 (+) True LOC120567769
XM_039815755.1 mRNA downstream 425560 3491589 ~ 3506128 (+) True LOC120568331
XM_039815754.1 mRNA downstream 445600 3511629 ~ 3525115 (+) False LOC120568327
XM_039816094.1 mRNA downstream 474958 3540987 ~ 3552017 (+) True LOC120568521
TU150157 other upstream 79745 2938149 ~ 2940848 (+) True G111486
TU150110 other upstream 196005 2816944 ~ 2824588 (+) True G111452
TU150017 other upstream 384550 2572188 ~ 2636043 (+) True G111404
TU150236 other downstream 322065 3388094 ~ 3399183 (+) False LOC120567769
TU150599 other downstream 434650 3500679 ~ 3525049 (+) False LOC120568327
TU150598 other downstream 445624 3511653 ~ 3525049 (+) True LOC120568327
TU150715 other downstream 1022615 4088644 ~ 4137543 (+) True G111848
TU150718 other downstream 1024479 4090508 ~ 4138933 (+) True G111850

Expression Profile