RNA id: TU150152


Basic Information

Item Value
RNA id TU150152
length 316
lncRNA type inter_gene
GC content 0.50
exon number 3
gene id G111484
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2931639 ~ 3066029 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgcgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcttagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150137 lncRNA upstream 194 2910549 ~ 2931445 (+) False G111475
TU150143 lncRNA upstream 1017 2914458 ~ 2930622 (+) True G111478
TU150148 lncRNA upstream 4491 2924392 ~ 2927148 (+) False G111483
TU150149 lncRNA upstream 4491 2924392 ~ 2927148 (+) True G111483
TU150135 lncRNA upstream 8437 2910549 ~ 2923202 (+) True G111475
TU150175 lncRNA downstream 9059 3070566 ~ 3145702 (+) True G111501
TU150155 lncRNA downstream 21405 3082912 ~ 3098747 (+) False G111485
TU150183 lncRNA downstream 37888 3099395 ~ 3107381 (+) True G111506
TU150185 lncRNA downstream 52430 3113937 ~ 3114442 (+) True G111508
TU150190 lncRNA downstream 56177 3117684 ~ 3118187 (+) True G111512
XM_039816303.1 mRNA upstream 104785 2787779 ~ 2826854 (+) True rasal2
XM_039816548.1 mRNA upstream 180067 2749854 ~ 2751572 (+) True LOC120568825
XM_039816549.1 mRNA upstream 197741 2732606 ~ 2733898 (+) True LOC120568826
XM_039816589.1 mRNA upstream 242423 2665824 ~ 2689216 (+) True nmnat2
XM_039816090.1 mRNA upstream 466799 2463673 ~ 2464840 (+) True LOC120568517
XM_039815924.1 mRNA downstream 237357 3298864 ~ 3304226 (+) True ptmab
XM_039814780.1 mRNA downstream 326547 3388054 ~ 3398106 (+) True LOC120567769
XM_039815755.1 mRNA downstream 430082 3491589 ~ 3506128 (+) True LOC120568331
XM_039815754.1 mRNA downstream 450122 3511629 ~ 3525115 (+) False LOC120568327
XM_039816094.1 mRNA downstream 479480 3540987 ~ 3552017 (+) True LOC120568521
TU150110 other upstream 107051 2816944 ~ 2824588 (+) True G111452
TU150017 other upstream 295596 2572188 ~ 2636043 (+) True G111404
TU150031 other upstream 295596 2615577 ~ 2636043 (+) False G111404
TU149996 other upstream 353708 2577121 ~ 2577931 (+) True G111388
TU149991 other upstream 491441 2439736 ~ 2440198 (+) False LOC120568516
TU150236 other downstream 326587 3388094 ~ 3399183 (+) False LOC120567769
TU150599 other downstream 439172 3500679 ~ 3525049 (+) False LOC120568327
TU150598 other downstream 450146 3511653 ~ 3525049 (+) True LOC120568327
TU150715 other downstream 1027137 4088644 ~ 4137543 (+) True G111848
TU150718 other downstream 1029001 4090508 ~ 4138933 (+) True G111850

Expression Profile