RNA id: TU150168


Basic Information

Item Value
RNA id TU150168
length 441
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G111495
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3023041 ~ 3025573 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagaaacacacacacacacacagaaacacacacacacagacagacagacagacacacacacacacacacagacacacacacacacacacacacacacacacacagaaacacacacacacacacagaaacacacacacacagacagacagacagacacacacacagacagagacagacacacacacacacacacacacacacacacacacacacacacacacacacacagacatacagacacacacacacagacacacacacacacacagacgcacacacacaaacacagacatacagacacagacacacacacactcagacctGATAACTGACAttacttaacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150158 lncRNA upstream 67932 2952608 ~ 2955109 (+) True G111487
TU150141 lncRNA upstream 74556 2942775 ~ 2948485 (+) True G111476
TU150138 lncRNA upstream 76164 2942775 ~ 2946877 (+) False G111476
TU150137 lncRNA upstream 91596 2910549 ~ 2931445 (+) False G111475
TU150154 lncRNA downstream 20912 3046485 ~ 3098747 (+) True G111485
TU150156 lncRNA downstream 20912 3046485 ~ 3066464 (+) False G111485
TU150172 lncRNA downstream 21366 3046939 ~ 3047847 (+) True G111498
TU150175 lncRNA downstream 44993 3070566 ~ 3145702 (+) True G111501
TU150155 lncRNA downstream 57339 3082912 ~ 3098747 (+) False G111485
XM_039816303.1 mRNA upstream 196187 2787779 ~ 2826854 (+) True rasal2
XM_039816548.1 mRNA upstream 271469 2749854 ~ 2751572 (+) True LOC120568825
XM_039816549.1 mRNA upstream 289143 2732606 ~ 2733898 (+) True LOC120568826
XM_039816589.1 mRNA upstream 333825 2665824 ~ 2689216 (+) True nmnat2
XM_039816090.1 mRNA upstream 558201 2463673 ~ 2464840 (+) True LOC120568517
XM_039815924.1 mRNA downstream 273291 3298864 ~ 3304226 (+) True ptmab
XM_039814780.1 mRNA downstream 362481 3388054 ~ 3398106 (+) True LOC120567769
XM_039815755.1 mRNA downstream 466016 3491589 ~ 3506128 (+) True LOC120568331
XM_039815754.1 mRNA downstream 486056 3511629 ~ 3525115 (+) False LOC120568327
XM_039816094.1 mRNA downstream 515414 3540987 ~ 3552017 (+) True LOC120568521
TU150153 other upstream 1783 3020593 ~ 3021258 (+) True G111484
TU150157 other upstream 82193 2938149 ~ 2940848 (+) True G111486
TU150110 other upstream 198453 2816944 ~ 2824588 (+) True G111452
TU150017 other upstream 386998 2572188 ~ 2636043 (+) True G111404
TU150236 other downstream 362521 3388094 ~ 3399183 (+) False LOC120567769
TU150599 other downstream 475106 3500679 ~ 3525049 (+) False LOC120568327
TU150598 other downstream 486080 3511653 ~ 3525049 (+) True LOC120568327
TU150715 other downstream 1063071 4088644 ~ 4137543 (+) True G111848
TU150718 other downstream 1064935 4090508 ~ 4138933 (+) True G111850

Expression Profile