RNA id: TU150172


Basic Information

Item Value
RNA id TU150172
length 264
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G111498
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3046939 ~ 3047847 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtttgtgtctgtgtctgtgtgtgtgtgtctgtgtgtgtctgtgtgtctgtgtgtgtttgtgtctgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtctgtgtttgtgtgtgtgtgtgtctgtgtgtctgtgtttgtgtgtgtgtgtgtctgtgtgtgtgcttgtgtctgtgtgtatttgtgtgttttgcgtgtgagtttgtgtgtttctgtgtgtgtgtgtgtgtttggg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150168 lncRNA upstream 21366 3023041 ~ 3025573 (+) True G111495
TU150158 lncRNA upstream 91830 2952608 ~ 2955109 (+) True G111487
TU150141 lncRNA upstream 98454 2942775 ~ 2948485 (+) True G111476
TU150138 lncRNA upstream 100062 2942775 ~ 2946877 (+) False G111476
TU150137 lncRNA upstream 115494 2910549 ~ 2931445 (+) False G111475
TU150175 lncRNA downstream 22719 3070566 ~ 3145702 (+) True G111501
TU150155 lncRNA downstream 35065 3082912 ~ 3098747 (+) False G111485
TU150183 lncRNA downstream 51548 3099395 ~ 3107381 (+) True G111506
TU150185 lncRNA downstream 66090 3113937 ~ 3114442 (+) True G111508
TU150190 lncRNA downstream 69837 3117684 ~ 3118187 (+) True G111512
XM_039816303.1 mRNA upstream 220085 2787779 ~ 2826854 (+) True rasal2
XM_039816548.1 mRNA upstream 295367 2749854 ~ 2751572 (+) True LOC120568825
XM_039816549.1 mRNA upstream 313041 2732606 ~ 2733898 (+) True LOC120568826
XM_039816589.1 mRNA upstream 357723 2665824 ~ 2689216 (+) True nmnat2
XM_039816090.1 mRNA upstream 582099 2463673 ~ 2464840 (+) True LOC120568517
XM_039815924.1 mRNA downstream 251017 3298864 ~ 3304226 (+) True ptmab
XM_039814780.1 mRNA downstream 340207 3388054 ~ 3398106 (+) True LOC120567769
XM_039815755.1 mRNA downstream 443742 3491589 ~ 3506128 (+) True LOC120568331
XM_039815754.1 mRNA downstream 463782 3511629 ~ 3525115 (+) False LOC120568327
XM_039816094.1 mRNA downstream 493140 3540987 ~ 3552017 (+) True LOC120568521
TU150153 other upstream 25681 3020593 ~ 3021258 (+) True G111484
TU150157 other upstream 106091 2938149 ~ 2940848 (+) True G111486
TU150110 other upstream 222351 2816944 ~ 2824588 (+) True G111452
TU150031 other upstream 410896 2615577 ~ 2636043 (+) False G111404
TU149996 other upstream 469008 2577121 ~ 2577931 (+) True G111388
TU150236 other downstream 340247 3388094 ~ 3399183 (+) False LOC120567769
TU150599 other downstream 452832 3500679 ~ 3525049 (+) False LOC120568327
TU150598 other downstream 463806 3511653 ~ 3525049 (+) True LOC120568327
TU150715 other downstream 1040797 4088644 ~ 4137543 (+) True G111848
TU150718 other downstream 1042661 4090508 ~ 4138933 (+) True G111850

Expression Profile