RNA id: TU150521



Basic Information


Item Value
RNA id TU150521
length 243
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G111713
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3376814 ~ 3377056 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


accagggtctctcctaagtggaatgcagccatcagtaatggtttaataccagggcctctcctaagtggaatgcagccatcagtaatggtttaataccagggcctctcctaagtggaatgcagccatcagtaatggtttaataccagggcctctcctaagtggaatgcagccatcattaatggtttaataccaggacctctcctaagtggaatgcagccatcattaatggtttaataccaggac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU150520 lncRNA downstream 1099 3375271 ~ 3375715 (-) True G111712
TU150510 lncRNA downstream 62844 3313689 ~ 3313970 (-) True G111706
TU150509 lncRNA downstream 69881 3305835 ~ 3306933 (-) True G111705
TU150508 lncRNA downstream 71287 3304415 ~ 3305527 (-) True G111704
TU150470 lncRNA downstream 72476 3299315 ~ 3304338 (-) True G111683
TU150524 lncRNA upstream 11074 3388130 ~ 3397965 (-) True G111714
TU150526 lncRNA upstream 21182 3398238 ~ 3399183 (-) True G111716
TU150553 lncRNA upstream 60856 3437912 ~ 3439115 (-) True G111740
TU150549 lncRNA upstream 68344 3445400 ~ 3449397 (-) True LOC120569104
TU150558 lncRNA upstream 109800 3486856 ~ 3487202 (-) True G111745
XM_039816093.1 mRNA downstream 5039 3349075 ~ 3371775 (-) False LOC120568520
XM_039815178.1 mRNA downstream 122445 3234368 ~ 3254369 (-) True LOC120568006
XM_039815177.1 mRNA downstream 122445 3242875 ~ 3254369 (-) False LOC120568006
XM_039815176.1 mRNA downstream 122445 3242875 ~ 3254369 (-) False LOC120568006
XM_039815174.1 mRNA downstream 147667 3212548 ~ 3229147 (-) True LOC120568005
XM_039816976.1 mRNA upstream 71657 3448713 ~ 3456534 (-) False LOC120569104
XM_039816975.1 mRNA upstream 71657 3448713 ~ 3456534 (-) False LOC120569104
XM_039816974.1 mRNA upstream 71657 3448713 ~ 3456534 (-) False LOC120569104
XM_039816973.1 mRNA upstream 71657 3448713 ~ 3456534 (-) False LOC120569104
XM_039816972.1 mRNA upstream 71657 3448713 ~ 3456534 (-) False LOC120569104
TU150514 other downstream 6875 3314646 ~ 3369939 (-) True LOC120568520
XR_005640646.1 other downstream 147667 3204287 ~ 3229147 (-) False LOC120568005
TU150424 other downstream 234944 2985332 ~ 3141870 (-) False LOC120568519
TU150430 other downstream 384968 2985332 ~ 2991846 (-) False LOC120568519
TU150296 other downstream 798800 2573304 ~ 2578014 (-) True G111573
TU150904 other upstream 658486 4035542 ~ 4036963 (-) True G111942
TU151047 other upstream 861046 4238102 ~ 4238670 (-) True G112043
TU151048 other upstream 861046 4238102 ~ 4238670 (-) False G112043
TU151050 other upstream 861046 4238102 ~ 4238670 (-) False G112043
TU151054 other upstream 861046 4238102 ~ 4238670 (-) False G112043

Expression Profile