RNA id: TU150558



Basic Information


Item Value
RNA id TU150558
length 347
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G111745
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3486856 ~ 3487202 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agagagagagagagagagagagagagagagagagagagagagagagagagagagagagagacagaggagagagagagagaaagagagagagagagagagagagagagagagagagagggagagagagagagagagagagagagagagagagagagagagagagggagagagagagagagagagagagagagagagagagagagagagagagggagagggagagagagagagaaggagagagagagagagagagagggagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagggagagagagagagagggagagag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU150549 lncRNA downstream 37459 3445400 ~ 3449397 (-) True LOC120569104
TU150553 lncRNA downstream 47741 3437912 ~ 3439115 (-) True G111740
TU150526 lncRNA downstream 87673 3398238 ~ 3399183 (-) True G111716
TU150524 lncRNA downstream 88891 3388130 ~ 3397965 (-) True G111714
TU150521 lncRNA downstream 109800 3376814 ~ 3377056 (-) True G111713
TU150563 lncRNA upstream 6826 3494028 ~ 3494269 (-) True G111750
TU150882 lncRNA upstream 8391 3495593 ~ 3596036 (-) False G111935
TU150883 lncRNA upstream 8391 3495593 ~ 3618428 (-) False G111935
TU150885 lncRNA upstream 8391 3495593 ~ 3521546 (-) False G111935
TU150896 lncRNA upstream 11833 3499035 ~ 3519518 (-) True G111938
XM_039816976.1 mRNA downstream 30322 3448713 ~ 3456534 (-) False LOC120569104
XM_039816975.1 mRNA downstream 30322 3448713 ~ 3456534 (-) False LOC120569104
XM_039816974.1 mRNA downstream 30322 3448713 ~ 3456534 (-) False LOC120569104
XM_039816973.1 mRNA downstream 30322 3448713 ~ 3456534 (-) False LOC120569104
XM_039816972.1 mRNA downstream 30322 3448713 ~ 3456534 (-) False LOC120569104
XM_039816095.1 mRNA upstream 77344 3564546 ~ 3576221 (-) True LOC120568522
XM_039815751.1 mRNA upstream 142470 3629672 ~ 3633397 (-) True LOC120568325
XM_039815749.1 mRNA upstream 184348 3671550 ~ 3706170 (-) True LOC120568323
XM_039816097.1 mRNA upstream 260095 3747297 ~ 3751140 (-) True LOC120568526
XM_039815747.1 mRNA upstream 262255 3749457 ~ 3760667 (-) False LOC120568321
TU150514 other downstream 116917 3314646 ~ 3369939 (-) True LOC120568520
XR_005640646.1 other downstream 257709 3204287 ~ 3229147 (-) False LOC120568005
TU150424 other downstream 344986 2985332 ~ 3141870 (-) False LOC120568519
TU150430 other downstream 495010 2985332 ~ 2991846 (-) False LOC120568519
TU150296 other downstream 908842 2573304 ~ 2578014 (-) True G111573
TU150904 other upstream 548340 4035542 ~ 4036963 (-) True G111942
TU151047 other upstream 750900 4238102 ~ 4238670 (-) True G112043
TU151048 other upstream 750900 4238102 ~ 4238670 (-) False G112043
TU151050 other upstream 750900 4238102 ~ 4238670 (-) False G112043
TU151054 other upstream 750900 4238102 ~ 4238670 (-) False G112043

Expression Profile