RNA id: TU150690


Basic Information

Item Value
RNA id TU150690
length 321
lncRNA type inter_gene
GC content 0.49
exon number 4
gene id G111832
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 4002014 ~ 4010693 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGGCACGTTCCTTTAATTAAGTCTAAAGCTACTTTTAGCACAAACTCGAGGTGACTTAAACTTCCAGCGGTCTTATTTACAGCCGTCGTCACTCTGGCCGACTCTCCGTCTTTCTCCTTTATTTCTCTTTGGGCTCCATGTCGTCACCGCCCGACACGTTTCCATCTTCGTCCTCGTCATCGACCATCCCCTTCAGGTAGGAGCGTTTGAACTCCTGGAACTCAAgctcgtcctcctcctcaTTCTCCTTCACTGCATCAGGTTTAGGATGCATCAGTTTGAAGGGAACTTCCAGGCCAACCTCACTTGATCCCATTATCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150674 lncRNA upstream 44740 3950944 ~ 3957274 (+) True G111819
TU150565 lncRNA upstream 149980 3850107 ~ 3852034 (+) False LOC120568521
TU150579 lncRNA upstream 151139 3850107 ~ 3850875 (+) False LOC120568521
TU150643 lncRNA upstream 160055 3791992 ~ 3841959 (+) True G111789
TU150692 lncRNA downstream 2081 4007416 ~ 4010693 (+) False G111832
TU150705 lncRNA downstream 79767 4085102 ~ 4087986 (+) True G111844
TU150719 lncRNA downstream 85692 4091027 ~ 4139026 (+) True G111851
TU150708 lncRNA downstream 86079 4091414 ~ 4139495 (+) True G111847
TU150720 lncRNA downstream 87504 4092839 ~ 4140904 (+) True G111852
XM_039816103.1 mRNA upstream 4155 3995617 ~ 3997859 (+) True LOC120568532
XM_039816102.1 mRNA upstream 9425 3986445 ~ 3992589 (+) True LOC120568531
XM_039816475.1 mRNA upstream 37961 3959592 ~ 3964053 (+) True dusp28
XM_039816474.1 mRNA upstream 37961 3959593 ~ 3964053 (+) False dusp28
XM_039816709.1 mRNA upstream 52448 3936631 ~ 3949566 (+) True vcpip1
XM_039816306.1 mRNA downstream 45985 4051320 ~ 4065021 (+) True crfb16
XM_039816105.1 mRNA downstream 206789 4212124 ~ 4323581 (+) False tmeff1a
XM_039815669.1 mRNA downstream 331750 4337085 ~ 4349158 (+) True cavin4a
XM_039815668.1 mRNA downstream 371830 4377165 ~ 4393309 (+) True ift57
XM_039815666.1 mRNA downstream 411286 4416621 ~ 4418585 (+) True LOC120568271
TU150599 other upstream 476965 3500679 ~ 3525049 (+) False LOC120568327
TU150598 other upstream 476965 3511653 ~ 3525049 (+) True LOC120568327
TU150236 other upstream 602831 3388094 ~ 3399183 (+) False LOC120567769
TU150165 other upstream 926113 3016958 ~ 3075901 (+) True G111494
TU150715 other downstream 83309 4088644 ~ 4137543 (+) True G111848
TU150718 other downstream 85173 4090508 ~ 4138933 (+) True G111850
TU150765 other downstream 260167 4265502 ~ 4326186 (+) True tmeff1a
TU150809 other downstream 493659 4498994 ~ 4539205 (+) False dnaaf11
TU150808 other downstream 522580 4527915 ~ 4529749 (+) False dnaaf11

Expression Profile