RNA id: TU150795


Basic Information

Item Value
RNA id TU150795
length 255
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G111891
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 4432508 ~ 4433103 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtagagtgcagatgtgagttgcgcatgcgtcactttgcgacaagtagcctacaagatgctaacggcggtttgagctaacgttagcaatcaagtaacCTACTAGATGCGAACGGCGTTTTGagttaacgttagcaatcaagtagcctacaagatgctaacggcggtttgagctaacgttagcaatcaagtagcctacaagatgctaacggcgttttgagctaacgttagcaatcaagtaacCTACTAGATGcgaac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150747 lncRNA upstream 127721 4237919 ~ 4304787 (+) False G111870
TU150751 lncRNA upstream 193763 4175530 ~ 4238745 (+) False G111870
TU150744 lncRNA upstream 193763 4237919 ~ 4238745 (+) False G111870
TU150749 lncRNA upstream 193763 4237919 ~ 4238745 (+) False G111870
TU150750 lncRNA upstream 193763 4237919 ~ 4238745 (+) False G111870
TU150798 lncRNA downstream 19796 4452813 ~ 4495568 (+) True G111893
TU150803 lncRNA downstream 51617 4484634 ~ 4488017 (+) True G111897
TU150797 lncRNA downstream 61881 4494898 ~ 4495891 (+) False G111893
TU150821 lncRNA downstream 77617 4510634 ~ 4539205 (+) False dnaaf11
TU150823 lncRNA downstream 77617 4510634 ~ 4539205 (+) False dnaaf11
XM_039815666.1 mRNA upstream 13923 4416621 ~ 4418585 (+) True LOC120568271
XM_039815668.1 mRNA upstream 39199 4377165 ~ 4393309 (+) True ift57
XM_039815669.1 mRNA upstream 83350 4337085 ~ 4349158 (+) True cavin4a
XM_039816105.1 mRNA upstream 108927 4212124 ~ 4323581 (+) False tmeff1a
XM_039816306.1 mRNA upstream 367487 4051320 ~ 4065021 (+) True crfb16
XM_039814903.1 mRNA downstream 25867 4458884 ~ 4474374 (+) False tmem71
XM_039814902.1 mRNA downstream 25867 4458884 ~ 4474374 (+) False tmem71
XM_039814904.1 mRNA downstream 27832 4460849 ~ 4474374 (+) True tmem71
XM_039816106.1 mRNA downstream 94405 4527422 ~ 4592347 (+) True dnaaf11
XM_039814535.1 mRNA downstream 183016 4616033 ~ 4785371 (+) True kcnq3
TU150765 other upstream 106322 4265502 ~ 4326186 (+) True tmeff1a
TU150718 other upstream 293575 4090508 ~ 4138933 (+) True G111850
TU150715 other upstream 294965 4088644 ~ 4137543 (+) True G111848
TU150599 other upstream 907459 3500679 ~ 3525049 (+) False LOC120568327
TU150809 other downstream 65977 4498994 ~ 4539205 (+) False dnaaf11
TU150808 other downstream 94898 4527915 ~ 4529749 (+) False dnaaf11
TU150812 other downstream 95347 4528364 ~ 4529749 (+) False dnaaf11
TU150815 other downstream 95347 4528364 ~ 4539205 (+) False dnaaf11
TU150822 other downstream 95347 4528364 ~ 4539205 (+) False dnaaf11

Expression Profile