RNA id: TU150798


Basic Information

Item Value
RNA id TU150798
length 645
lncRNA type sense_over
GC content 0.50
exon number 3
gene id G111893
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 4452813 ~ 4495891 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtctctctctctctctgtgtgtgtgtctctctctctctgtgtgtgtgtgtctctgtgtgtgtgtctctctctctgtgtgtgtgtctctctctctgtgtgtgtctctctctctctgtgtgtgtctctctctctctgtgtgtgtgtctctctctctgtgtgtgtgtctctctctctgtgtgtgtctctctctctgtgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtctctctctctgtgtgtgtgtctctctctgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctctctgtgtgtgtgtgtgtc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150794 lncRNA upstream 19710 4432508 ~ 4433103 (+) False G111891
TU150795 lncRNA upstream 19796 4432508 ~ 4433017 (+) True G111891
TU150747 lncRNA upstream 148026 4237919 ~ 4304787 (+) False G111870
TU150751 lncRNA upstream 214068 4175530 ~ 4238745 (+) False G111870
TU150744 lncRNA upstream 214068 4237919 ~ 4238745 (+) False G111870
TU150821 lncRNA downstream 15066 4510634 ~ 4539205 (+) False dnaaf11
TU150823 lncRNA downstream 15066 4510634 ~ 4539205 (+) False dnaaf11
TU150828 lncRNA downstream 20132 4515700 ~ 4516747 (+) True G111904
TU150831 lncRNA downstream 22681 4518249 ~ 4520189 (+) True G111906
TU150813 lncRNA downstream 32796 4528364 ~ 4529188 (+) False dnaaf11
XM_039815666.1 mRNA upstream 34228 4416621 ~ 4418585 (+) True LOC120568271
XM_039815668.1 mRNA upstream 59504 4377165 ~ 4393309 (+) True ift57
XM_039815669.1 mRNA upstream 103655 4337085 ~ 4349158 (+) True cavin4a
XM_039816105.1 mRNA upstream 129232 4212124 ~ 4323581 (+) False tmeff1a
XM_039816306.1 mRNA upstream 387792 4051320 ~ 4065021 (+) True crfb16
XM_039816106.1 mRNA downstream 31854 4527422 ~ 4592347 (+) True dnaaf11
XM_039814535.1 mRNA downstream 120465 4616033 ~ 4785371 (+) True kcnq3
XM_039814912.1 mRNA downstream 309996 4805564 ~ 4835053 (+) True LOC120567839
XM_039814499.1 mRNA downstream 341896 4837464 ~ 4888212 (+) True oc90
XM_039814498.1 mRNA downstream 343990 4839558 ~ 4888212 (+) False oc90
TU150765 other upstream 126627 4265502 ~ 4326186 (+) True tmeff1a
TU150718 other upstream 313880 4090508 ~ 4138933 (+) True G111850
TU150715 other upstream 315270 4088644 ~ 4137543 (+) True G111848
TU150599 other upstream 927764 3500679 ~ 3525049 (+) False LOC120568327
TU150809 other downstream 3426 4498994 ~ 4539205 (+) False dnaaf11
TU150808 other downstream 32347 4527915 ~ 4529749 (+) False dnaaf11
TU150812 other downstream 32796 4528364 ~ 4529749 (+) False dnaaf11
TU150815 other downstream 32796 4528364 ~ 4539205 (+) False dnaaf11
TU150822 other downstream 32796 4528364 ~ 4539205 (+) False dnaaf11

Expression Profile