RNA id: TU150857


Basic Information

Item Value
RNA id TU150857
length 447
lncRNA type intronic
GC content 0.50
exon number 3
gene id G111920
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 4616016 ~ 4635012 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctctctctctctctctctctgtctctctctctgctctctctctcttgtctctctctctctctctctgtctgtctgtctctctctctctctctctctctctgtctctctctgtctctctctctgtctctctctctctgtctctctctctctctctgtctgtctctctctctctctctctctctctctctctctctgtctctctctgtctctctctctgtctctctctctgtctctctctctctctctctctgtctctctctctctcttgtctctgtctctctctgtctctctctctgtctctctctctctctcctctgtctctctctctctctctctctctgtctctctctctgtctctctctctctctctctctctctctctctctctctctctctctgtctctctctctctctctctctctctctctctctctctctctctctctg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150833 lncRNA upstream 36419 4574878 ~ 4592301 (+) False dnaaf11
TU150816 lncRNA upstream 89515 4528873 ~ 4539205 (+) False dnaaf11
TU150817 lncRNA upstream 89515 4529250 ~ 4539205 (+) False dnaaf11
TU150818 lncRNA upstream 89515 4529250 ~ 4539205 (+) False dnaaf11
TU150824 lncRNA upstream 99532 4528364 ~ 4529188 (+) False dnaaf11
TU150864 lncRNA downstream 4081 4633886 ~ 4634242 (+) True G111925
TU151187 lncRNA downstream 158822 4788627 ~ 4788876 (+) True G112140
TU151203 lncRNA downstream 258796 4888601 ~ 4891470 (+) True G112155
TU151204 lncRNA downstream 258796 4888601 ~ 4891470 (+) False G112155
TU151205 lncRNA downstream 258796 4888601 ~ 4891470 (+) False G112155
XM_039816106.1 mRNA upstream 36373 4527422 ~ 4592347 (+) True dnaaf11
XM_039814903.1 mRNA upstream 154346 4458884 ~ 4474374 (+) False tmem71
XM_039814902.1 mRNA upstream 154346 4458884 ~ 4474374 (+) False tmem71
XM_039814904.1 mRNA upstream 154346 4460849 ~ 4474374 (+) True tmem71
XM_039815666.1 mRNA upstream 210135 4416621 ~ 4418585 (+) True LOC120568271
XM_039814912.1 mRNA downstream 175759 4805564 ~ 4835053 (+) True LOC120567839
XM_039814499.1 mRNA downstream 207659 4837464 ~ 4888212 (+) True oc90
XM_039814498.1 mRNA downstream 209753 4839558 ~ 4888212 (+) False oc90
XM_039816414.1 mRNA downstream 569288 5199093 ~ 5336492 (+) True adcy8
XM_039816108.1 mRNA downstream 774648 5404453 ~ 5408621 (+) True LOC120568538
TU150839 other upstream 82638 4545425 ~ 4546082 (+) True G111910
TU150815 other upstream 89515 4528364 ~ 4539205 (+) False dnaaf11
TU150822 other upstream 89515 4528364 ~ 4539205 (+) False dnaaf11
TU150808 other upstream 98971 4527915 ~ 4529749 (+) False dnaaf11
TU151330 other downstream 1158551 5788356 ~ 5789292 (+) False LOC120568547
TU151409 other downstream 1373880 6003685 ~ 6016600 (+) False LOC120568055
unassigned_transcript_535 other downstream 1610376 6240181 ~ 6240262 (+) True trnas-cga_6
unassigned_transcript_536 other downstream 1611017 6240822 ~ 6240903 (+) True trnas-uga_21
TU151560 other downstream 1621585 6251390 ~ 6321990 (+) True G112400

Expression Profile