RNA id: TU150880


Basic Information

Item Value
RNA id TU150880
length 468
lncRNA type read_through
GC content 0.48
exon number 3
gene id G111935
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3495593 ~ 3692502 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtcaaactgtaacccagtttttcacCAAGAGAGGTGGGTAGCCTGTAGTCTGTGAGTGGTATTAACCTGTTGGCTTAATGTCCATAGTggaataagctagctagctacaggctagtgctagcctacatttaatcaccatttAATCAGTGCAGGGAAACGTTTAGCAAGATGTTCATATTAAATCATTGTCCCTGCCCCTTTTAGCAGCCTTAACAACAGATGAGTCAGCAGCAGCCCAGTCTCCCCCTAACTGAGCCCCTCCCTGTCCCAGTGAAGAAGtgacgtccctgGAATCGGCTATTCAAAGCCCCGCTGAAGCAGATATTCTGTGCCGGCGCCAGGAGAAACACGGAGCTGACTCCAGGCTGGACTGGACTTGGTTGTTGTTTCACCCTGGGACAGAATATTGGACAATCCATGGTTCTATTGTCTCCCTGGTTTTTGAGGAGATTGTGATTTTAATGTCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150882 lncRNA downstream 19110 3495593 ~ 3596036 (-) False G111935
TU150928 lncRNA downstream 29620 3574579 ~ 3585526 (-) False LOC120568522
TU150906 lncRNA downstream 64139 3504498 ~ 3551007 (-) False G111942
XR_005640703.1 lncRNA downstream 67342 3544653 ~ 3547804 (-) False LOC120568338
XR_005640702.1 lncRNA downstream 68347 3544653 ~ 3546799 (-) True LOC120568338
XR_005640708.1 lncRNA upstream 25764 3718266 ~ 3721122 (-) True LOC120568342
XR_005640700.1 lncRNA upstream 107693 3800195 ~ 3803506 (-) False LOC120568335
XR_005640699.1 lncRNA upstream 107693 3800195 ~ 3802495 (-) False LOC120568335
TU150892 lncRNA upstream 110674 3803176 ~ 3821190 (-) True LOC120568335
TU150988 lncRNA upstream 275492 3967994 ~ 3969218 (-) True G111997
XM_039816095.1 mRNA downstream 38925 3564546 ~ 3576221 (-) True LOC120568522
XM_039816975.1 mRNA downstream 158612 3448713 ~ 3456534 (-) False LOC120569104
XM_039816097.1 mRNA upstream 54795 3747297 ~ 3751140 (-) True LOC120568526
XM_039815747.1 mRNA upstream 56955 3749457 ~ 3760667 (-) False LOC120568321
XM_039815745.1 mRNA upstream 56955 3749457 ~ 3760639 (-) False LOC120568321
XM_039815744.1 mRNA upstream 56955 3749457 ~ 3759584 (-) True LOC120568321
XM_039815748.1 mRNA upstream 56955 3749457 ~ 3759582 (-) False LOC120568321
TU150514 other downstream 245207 3314646 ~ 3369939 (-) True LOC120568520
XR_005640646.1 other downstream 385999 3204287 ~ 3229147 (-) False LOC120568005
TU150424 other downstream 473276 2985332 ~ 3141870 (-) False LOC120568519
TU150430 other downstream 623300 2985332 ~ 2991846 (-) False LOC120568519
TU150296 other downstream 1037132 2573304 ~ 2578014 (-) True G111573
TU150904 other upstream 343040 4035542 ~ 4036963 (-) True G111942
TU151047 other upstream 545600 4238102 ~ 4238670 (-) True G112043
TU151048 other upstream 545600 4238102 ~ 4238670 (-) False G112043
TU151050 other upstream 545600 4238102 ~ 4238670 (-) False G112043
TU151054 other upstream 545600 4238102 ~ 4238670 (-) False G112043

Expression Profile