RNA id: TU150882


Basic Information

Item Value
RNA id TU150882
length 313
lncRNA type sense_over
GC content 0.56
exon number 2
gene id G111935
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3495593 ~ 3692502 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GACGGATAGACCGGCTGTGTCCTGCAGCGGCCTGGCTTGCTGATCTTCTCCCTCGGTGTTGCTGCTGACTGGATCTCCTGTACCCTGGTGGAGCTGAATCCCAGACTCTGCAGTGAAGTGGTCCTTTTCTCCCACACTGATGCGTGGTGACGTCCCTGGAATCGGCTATCCAAAGCCCCGCTGAAGCAGATCTTCTGTGCCGGCGCCAGGAGAAACACGGAGCTGACTCCAGGCTGGACTGGACTTGGTTGTTGTTTCACCCTGGGACAGAATATTGGACAATCCATGGTTCTATTGTCTCCTCTGGTTTTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150563 lncRNA downstream 1324 3494028 ~ 3494269 (-) True G111750
TU150558 lncRNA downstream 8391 3486856 ~ 3487202 (-) True G111745
TU150549 lncRNA downstream 46196 3445400 ~ 3449397 (-) True LOC120569104
TU150553 lncRNA downstream 56478 3437912 ~ 3439115 (-) True G111740
TU150526 lncRNA downstream 96410 3398238 ~ 3399183 (-) True G111716
TU150880 lncRNA upstream 19110 3615146 ~ 3692502 (-) False G111935
XR_005640698.1 lncRNA upstream 19143 3615179 ~ 3618414 (-) True LOC120568334
TU150918 lncRNA upstream 33529 3629565 ~ 3633399 (-) False LOC120568325
TU150923 lncRNA upstream 63740 3659776 ~ 3724882 (-) True G111946
TU150938 lncRNA upstream 79461 3675497 ~ 3701800 (-) True G111960
XM_039816976.1 mRNA downstream 39059 3448713 ~ 3456534 (-) False LOC120569104
XM_039815751.1 mRNA upstream 33636 3629672 ~ 3633397 (-) True LOC120568325
XM_039815749.1 mRNA upstream 75514 3671550 ~ 3706170 (-) True LOC120568323
XM_039816097.1 mRNA upstream 151261 3747297 ~ 3751140 (-) True LOC120568526
XM_039815747.1 mRNA upstream 153421 3749457 ~ 3760667 (-) False LOC120568321
XM_039815745.1 mRNA upstream 153421 3749457 ~ 3760639 (-) False LOC120568321
TU150514 other downstream 125654 3314646 ~ 3369939 (-) True LOC120568520
XR_005640646.1 other downstream 266446 3204287 ~ 3229147 (-) False LOC120568005
TU150424 other downstream 353723 2985332 ~ 3141870 (-) False LOC120568519
TU150430 other downstream 503747 2985332 ~ 2991846 (-) False LOC120568519
TU150296 other downstream 917579 2573304 ~ 2578014 (-) True G111573
TU150904 other upstream 439506 4035542 ~ 4036963 (-) True G111942
TU151047 other upstream 642066 4238102 ~ 4238670 (-) True G112043
TU151048 other upstream 642066 4238102 ~ 4238670 (-) False G112043
TU151050 other upstream 642066 4238102 ~ 4238670 (-) False G112043
TU151054 other upstream 642066 4238102 ~ 4238670 (-) False G112043

Expression Profile