RNA id: TU151049


Basic Information

Item Value
RNA id TU151049
length 477
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G112043
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 4238102 ~ 4238670 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tgtgtgtctgtgtgtgtgtgtctgagtgtgtgtgtgtgtctgagtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgagtgtgtgtgtgtgtgtgtctgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgagtgtgtgtgtgtgtgtgtgtctgagtgtgtgtgtgtgtctgagtgtgtgtgtgtgtgtgtgtgtgtctgagtgtgtgtgtgtgtgtgtgtgtgtgactgagtgtgtgtgtgtgtgtgtgtgtgtctgagtgtgtgtgtgtctgtgtgtgtgtctgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgagtgtgtgtgtgtgtgtgtctgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151023 lncRNA downstream 97182 4092565 ~ 4140920 (-) True G112019
TU151022 lncRNA downstream 99171 4090508 ~ 4138931 (-) True G112018
TU151015 lncRNA downstream 109730 4107443 ~ 4128372 (-) True G112012
TU151010 lncRNA downstream 137234 4100174 ~ 4100868 (-) True G112009
XR_005640616.1 lncRNA downstream 156020 4074729 ~ 4082082 (-) False LOC120567799
TU151060 lncRNA upstream 49109 4287779 ~ 4288307 (-) True G112048
TU151062 lncRNA upstream 67533 4306203 ~ 4306723 (-) True G112050
TU151083 lncRNA upstream 154180 4392850 ~ 4409467 (-) True G112061
TU151090 lncRNA upstream 189848 4428518 ~ 4495792 (-) True G112068
TU151092 lncRNA upstream 190357 4429027 ~ 4480919 (-) True G112069
XM_039815664.1 mRNA downstream 69446 4145863 ~ 4168656 (-) True slc39a6
XM_039815665.1 mRNA downstream 69786 4147763 ~ 4168316 (-) False slc39a6
XM_039815667.1 mRNA downstream 116751 4110746 ~ 4121351 (-) True si:ch73-170d6.2
XM_039814702.1 mRNA downstream 210516 4021167 ~ 4027586 (-) True cldn15la
XM_039816388.1 mRNA downstream 219840 4001441 ~ 4018262 (-) True saga
XM_039814907.1 mRNA upstream 248658 4487328 ~ 4499789 (-) False LOC120567835
XM_039814906.1 mRNA upstream 248658 4487328 ~ 4499789 (-) False LOC120567835
XM_039814905.1 mRNA upstream 248658 4487328 ~ 4499788 (-) True LOC120567835
XM_039814909.1 mRNA upstream 267052 4505722 ~ 4510614 (-) True LOC120567837
XM_039814908.1 mRNA upstream 267638 4506308 ~ 4510611 (-) False LOC120567837
TU150904 other downstream 201139 4035542 ~ 4036963 (-) True G111942
TU150514 other downstream 868163 3314646 ~ 3369939 (-) True LOC120568520
XR_005640646.1 other downstream 1008955 3204287 ~ 3229147 (-) False LOC120568005
TU150424 other downstream 1096232 2985332 ~ 3141870 (-) False LOC120568519
TU151058 other upstream 28868 4267538 ~ 4284083 (-) True G112046
TU151299 other upstream 1425334 5664004 ~ 5668687 (-) True G112233
TU151457 other upstream 1501975 5740645 ~ 5746081 (-) False LOC120568546
TU151454 other upstream 1554493 5793163 ~ 5852447 (-) True G112328
TU151456 other upstream 1554493 5793163 ~ 5852447 (-) False G112328

Expression Profile