RNA id: TU151083



Basic Information


Item Value
RNA id TU151083
length 471
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G112061
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 4392850 ~ 4409467 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GTTACTACTTATGAAGCCAGAAATTATCTTTATacaaatttattttatgttcATATACACAAAAGATACACAATACGGGACATTCAGGACAAAGAGCCAAATGGATTAACTGTTCAACTCCAAATGTTTTTATGACTTAATGCTGCtgcaaatacaaaaaacaatgtttttgaagtataaataaatagttttttttctccattttcaaaatgaaactCCAAGCGCCTCAGCCCTTTGAGTTCACGTGAGATTTGGGTTCCTGTTTCAGGTGCCCAGTGCGGAGGTGGACCTAAGCGAAGGGCCCGGCGACGGGCTCGGAGATGTTGGTGGCGTGCATGTCGCGTGTCATGTTGGACTTCTCTTTGAGTTTGGCCTGCAGCAGCGTGTGCTCGACCACGCCGATCCTCACGTCCATCTGAACGATCTCCTGCTTCAACTTGGTCAGACTCTGCTTGATCTTCACCACCGGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU151062 lncRNA downstream 86127 4306203 ~ 4306723 (-) True G112050
TU151060 lncRNA downstream 104543 4287779 ~ 4288307 (-) True G112048
TU151049 lncRNA downstream 154180 4238102 ~ 4238670 (-) False G112043
TU151090 lncRNA upstream 19051 4428518 ~ 4495792 (-) True G112068
TU151092 lncRNA upstream 19560 4429027 ~ 4480919 (-) True G112069
XR_005640694.1 lncRNA upstream 20360 4429827 ~ 4430227 (-) False LOC120568277
TU151101 lncRNA upstream 20360 4429827 ~ 4430354 (-) True LOC120568277
TU151117 lncRNA upstream 58890 4468357 ~ 4469023 (-) True G112086
XM_039815664.1 mRNA downstream 224194 4145863 ~ 4168656 (-) True slc39a6
XM_039815665.1 mRNA downstream 224534 4147763 ~ 4168316 (-) False slc39a6
XM_039815667.1 mRNA downstream 271499 4110746 ~ 4121351 (-) True si:ch73-170d6.2
XM_039814702.1 mRNA downstream 365264 4021167 ~ 4027586 (-) True cldn15la
XM_039816388.1 mRNA downstream 374588 4001441 ~ 4018262 (-) True saga
XM_039814907.1 mRNA upstream 77861 4487328 ~ 4499789 (-) False LOC120567835
XM_039814906.1 mRNA upstream 77861 4487328 ~ 4499789 (-) False LOC120567835
XM_039814905.1 mRNA upstream 77861 4487328 ~ 4499788 (-) True LOC120567835
XM_039814909.1 mRNA upstream 96255 4505722 ~ 4510614 (-) True LOC120567837
XM_039814908.1 mRNA upstream 96841 4506308 ~ 4510611 (-) False LOC120567837
TU151058 other downstream 108767 4267538 ~ 4284083 (-) True G112046
TU151047 other downstream 154180 4238102 ~ 4238670 (-) True G112043
TU151299 other upstream 1254537 5664004 ~ 5668687 (-) True G112233
TU151457 other upstream 1331178 5740645 ~ 5746081 (-) False LOC120568546
TU151454 other upstream 1383696 5793163 ~ 5852447 (-) True G112328
TU151456 other upstream 1383696 5793163 ~ 5852447 (-) False G112328
XR_005640645.1 other upstream 1765089 6174556 ~ 6175551 (-) False LOC120567959

Expression Profile