RNA id: TU151128



Basic Information


Item Value
RNA id TU151128
length 208
lncRNA type read_through
GC content 0.50
exon number 2
gene id G112094
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 4495364 ~ 4542182 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AGCCTCTCAGacacacacagagagagagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagagagagacacacacacacacacacacacacacacacacagagagagagacacacacacacacacacacacacacacacacagagagacacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU151126 lncRNA downstream 2987 4491520 ~ 4492377 (-) True G112092
TU151125 lncRNA downstream 5031 4489886 ~ 4490333 (-) True G112091
TU151092 lncRNA downstream 14445 4429027 ~ 4480919 (-) True G112069
TU151117 lncRNA downstream 26341 4468357 ~ 4469023 (-) True G112086
TU151101 lncRNA downstream 65010 4429827 ~ 4430354 (-) True LOC120568277
TU151165 lncRNA upstream 72856 4615038 ~ 4629833 (-) True G112121
TU151166 lncRNA upstream 72856 4615038 ~ 4629833 (-) False G112121
TU151168 lncRNA upstream 91708 4633890 ~ 4634311 (-) False G112122
TU151169 lncRNA upstream 91708 4633890 ~ 4665462 (-) True G112122
TU151189 lncRNA upstream 250150 4792332 ~ 4796397 (-) True G112142
XM_039815664.1 mRNA downstream 326708 4145863 ~ 4168656 (-) True slc39a6
XM_039815665.1 mRNA downstream 327048 4147763 ~ 4168316 (-) False slc39a6
XM_039815667.1 mRNA downstream 374013 4110746 ~ 4121351 (-) True si:ch73-170d6.2
XM_039814702.1 mRNA downstream 467778 4021167 ~ 4027586 (-) True cldn15la
XM_039816388.1 mRNA downstream 477102 4001441 ~ 4018262 (-) True saga
XM_039815921.1 mRNA upstream 353079 4895261 ~ 5063854 (-) True efr3a
XM_039815920.1 mRNA upstream 353079 4895261 ~ 5048654 (-) False efr3a
XM_039815922.1 mRNA upstream 353079 4895261 ~ 5048653 (-) False efr3a
XM_039815923.1 mRNA upstream 364207 4906389 ~ 5048656 (-) False efr3a
XM_039816107.1 mRNA upstream 565859 5108041 ~ 5148701 (-) True LOC120568537
TU151058 other downstream 211281 4267538 ~ 4284083 (-) True G112046
TU151047 other downstream 256694 4238102 ~ 4238670 (-) True G112043
TU151299 other upstream 1121822 5664004 ~ 5668687 (-) True G112233
TU151457 other upstream 1198463 5740645 ~ 5746081 (-) False LOC120568546
TU151454 other upstream 1250981 5793163 ~ 5852447 (-) True G112328
TU151456 other upstream 1250981 5793163 ~ 5852447 (-) False G112328
XR_005640645.1 other upstream 1632374 6174556 ~ 6175551 (-) False LOC120567959

Expression Profile