RNA id: TU151240



Basic Information


Item Value
RNA id TU151240
length 273
lncRNA type inter_gene
GC content 0.39
exon number 2
gene id G112184
representative False

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 5076660 ~ 5077815 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tatcagctgtgttgtattaacagggagagtctaacctatcagctgtgttgtattaacagagactaacctatcagctgtgttgtattaacagagactaacatatcagctgtgttgtattaacagggagagtctaacctatcagctgtgttgtattaacagagactaacctatcagctgtgttgtattaacagggagagtctaacctatcagctgtgttgtattaacagagactaacctatcagctgtgttgtattaacagggagagactaacct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU151238 lncRNA downstream 8361 5067974 ~ 5068299 (-) True G112183
TU151235 lncRNA downstream 67664 5008598 ~ 5008996 (-) True G112180
TU151231 lncRNA downstream 96561 4924191 ~ 4980099 (-) True G112177
TU151230 lncRNA downstream 161416 4914824 ~ 4915244 (-) True G112176
XR_005640594.1 lncRNA downstream 190392 4881968 ~ 4886268 (-) False LOC120567597
TU151249 lncRNA upstream 76088 5153903 ~ 5155029 (-) True G112189
TU151251 lncRNA upstream 117797 5195612 ~ 5195814 (-) True G112191
TU151257 lncRNA upstream 121430 5199245 ~ 5199490 (-) True G112196
TU151258 lncRNA upstream 121927 5199742 ~ 5200108 (-) True G112197
TU151273 lncRNA upstream 308735 5386550 ~ 5386751 (-) True G112212
XM_039815921.1 mRNA downstream 12806 4895261 ~ 5063854 (-) True efr3a
XM_039815923.1 mRNA downstream 28004 4906389 ~ 5048656 (-) False efr3a
XM_039815920.1 mRNA downstream 28006 4895261 ~ 5048654 (-) False efr3a
XM_039815922.1 mRNA downstream 28007 4895261 ~ 5048653 (-) False efr3a
XM_039814910.1 mRNA downstream 549479 4519361 ~ 4527181 (-) True si:dkey-7l6.3
XM_039816107.1 mRNA upstream 30226 5108041 ~ 5148701 (-) True LOC120568537
XM_039816265.1 mRNA upstream 346176 5423991 ~ 5486661 (-) True basp1
XM_039814557.1 mRNA upstream 606401 5684216 ~ 5699240 (-) True march11
XM_039815113.1 mRNA upstream 627789 5705604 ~ 5718217 (-) True znf622
XM_039816131.1 mRNA upstream 645918 5723733 ~ 5746068 (-) True LOC120568546
TU151058 other downstream 792577 4267538 ~ 4284083 (-) True G112046
TU151047 other downstream 837990 4238102 ~ 4238670 (-) True G112043
TU151299 other upstream 586189 5664004 ~ 5668687 (-) True G112233
TU151457 other upstream 662830 5740645 ~ 5746081 (-) False LOC120568546
TU151454 other upstream 715348 5793163 ~ 5852447 (-) True G112328
TU151456 other upstream 715348 5793163 ~ 5852447 (-) False G112328
XR_005640645.1 other upstream 1096741 6174556 ~ 6175551 (-) False LOC120567959

Expression Profile