RNA id: TU151273



Basic Information


Item Value
RNA id TU151273
length 202
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G112212
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 5386550 ~ 5386751 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


actAAATGGATCTATCACGGATAACCCCgaccaccctctccaccccacacaggtccaacagaggagcaccttctctaagaggctccgacagcttcgatgtcgcacggaccgctacaggaaatcattcctaccacaggcaattcaactttttaacacttcatcactgagtgggagataagactcatatacatcacaacTGCAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU151258 lncRNA downstream 186442 5199742 ~ 5200108 (-) True G112197
TU151257 lncRNA downstream 187060 5199245 ~ 5199490 (-) True G112196
TU151251 lncRNA downstream 190736 5195612 ~ 5195814 (-) True G112191
TU151249 lncRNA downstream 231521 5153903 ~ 5155029 (-) True G112189
TU151240 lncRNA downstream 308735 5076660 ~ 5077815 (-) False G112184
XR_005640670.1 lncRNA upstream 266248 5652999 ~ 5658362 (-) True LOC120568187
TU151309 lncRNA upstream 310937 5697688 ~ 5697941 (-) True G112241
TU151313 lncRNA upstream 317545 5704296 ~ 5704574 (-) True G112245
TU151322 lncRNA upstream 333906 5720657 ~ 5721970 (-) True G112253
TU151460 lncRNA upstream 387662 5774413 ~ 5791763 (-) True G112332
XM_039816107.1 mRNA downstream 237849 5108041 ~ 5148701 (-) True LOC120568537
XM_039815921.1 mRNA downstream 322696 4895261 ~ 5063854 (-) True efr3a
XM_039816265.1 mRNA upstream 37240 5423991 ~ 5486661 (-) True basp1
XM_039814557.1 mRNA upstream 297465 5684216 ~ 5699240 (-) True march11
XM_039815113.1 mRNA upstream 318853 5705604 ~ 5718217 (-) True znf622
XM_039816131.1 mRNA upstream 336982 5723733 ~ 5746068 (-) True LOC120568546
XM_039815118.1 mRNA upstream 423575 5810326 ~ 5812362 (-) True LOC120567975
TU151058 other downstream 1102467 4267538 ~ 4284083 (-) True G112046
TU151047 other downstream 1147880 4238102 ~ 4238670 (-) True G112043
TU151299 other upstream 277253 5664004 ~ 5668687 (-) True G112233
TU151457 other upstream 353894 5740645 ~ 5746081 (-) False LOC120568546
TU151454 other upstream 406412 5793163 ~ 5852447 (-) True G112328
TU151456 other upstream 406412 5793163 ~ 5852447 (-) False G112328
XR_005640645.1 other upstream 787805 6174556 ~ 6175551 (-) False LOC120567959

Expression Profile