RNA id: TU151530


Basic Information

Item Value
RNA id TU151530
length 456
lncRNA type inter_gene
GC content 0.36
exon number 2
gene id G112383
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6082641 ~ 6105817 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

caagatttcacattttattgattCTATTTTACAGACAAGCTTTTCATAAAAGCAAAACCACTTGGCTTGCAAGGCATGCATGaatatatttttacatataCATGTGTTTGTTTCTCAGCTCGTGGAGCTCCCTCTGTGTGGACTAGCAGCGATTTAAGAGCAGTTAACAGCTGACACAGAGCAGCTCAAACCTTCATGTTTAAGTGCCGCACGTTTTATGGCTCATTTAGTTTTAAAGTTAAATAATACTTCACTCTTCCAGGAGCAGGCAGTTTTCTTAAAATCTCCACACAGTTGTTTCACCTTCATTTTAAAGACCTCGAAGTAGTCAGATACATTTCAGAGTTACTAAACACAGTAAACTGTTAATATTTCGTCTCGTGTTCGCTACAAACGTGATCCATAAGCTCAATACTGGccgaaaaaaaaatcatctctctctttttttttttttat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151484 lncRNA downstream 88868 5922747 ~ 5993773 (-) True G112352
TU151460 lncRNA downstream 290878 5774413 ~ 5791763 (-) True G112332
TU151322 lncRNA downstream 360671 5720657 ~ 5721970 (-) True G112253
TU151313 lncRNA downstream 378067 5704296 ~ 5704574 (-) True G112245
TU151309 lncRNA downstream 384700 5697688 ~ 5697941 (-) True G112241
TU151527 lncRNA upstream 7645 6113462 ~ 6116144 (-) True G112381
TU151626 lncRNA upstream 241518 6347335 ~ 6347853 (-) True G112453
TU151627 lncRNA upstream 241518 6347335 ~ 6347853 (-) False G112453
TU151638 lncRNA upstream 250981 6356798 ~ 6357990 (-) True G112460
TU151639 lncRNA upstream 252262 6358079 ~ 6359329 (-) True G112461
XM_039816327.1 mRNA downstream 3804 6077151 ~ 6078837 (-) True LOC120568672
XM_039815247.1 mRNA downstream 19649 6060725 ~ 6062992 (-) True LOC120568053
XM_039816133.1 mRNA downstream 36389 6045322 ~ 6046252 (-) True LOC120568550
XM_039815245.1 mRNA downstream 100103 5977281 ~ 5982538 (-) True nol7
XM_039815240.1 mRNA downstream 165501 5888027 ~ 5917140 (-) True LOC120568045
XM_039815073.1 mRNA upstream 59331 6165148 ~ 6169113 (-) True LOC120567957
XM_039815076.1 mRNA upstream 66464 6172281 ~ 6178886 (-) True LOC120567959
XM_039815074.1 mRNA upstream 69756 6175573 ~ 6178577 (-) True LOC120567958
XM_039815075.1 mRNA upstream 70915 6176732 ~ 6178577 (-) False LOC120567958
XM_039816825.1 mRNA upstream 150483 6256300 ~ 6283498 (-) True LOC120569024
TU151454 other downstream 230194 5793163 ~ 5852447 (-) True G112328
TU151456 other downstream 230194 5793163 ~ 5852447 (-) False G112328
TU151457 other downstream 336560 5740645 ~ 5746081 (-) False LOC120568546
TU151299 other downstream 413954 5664004 ~ 5668687 (-) True G112233
TU151058 other downstream 1798558 4267538 ~ 4284083 (-) True G112046
XR_005640645.1 other upstream 68739 6174556 ~ 6175551 (-) False LOC120567959
unassigned_transcript_509 other upstream 94845 6200662 ~ 6200743 (-) True trnas-uga_1
unassigned_transcript_510 other upstream 99575 6205392 ~ 6205473 (-) True trnas-cga
unassigned_transcript_511 other upstream 100509 6206326 ~ 6206407 (-) True trnas-cga_1
unassigned_transcript_512 other upstream 102673 6208490 ~ 6208571 (-) True trnas-cga_2

Expression Profile