RNA id: TU151912


Basic Information

Item Value
RNA id TU151912
length 654
RNA type TUCP
GC content 0.41
exon number 2
gene id G112670
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 7035027 ~ 7035700 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCACCATCGGGAGGCTACGACATTAACTTCGGTGTCTGACAAATGCTCGGACTTTAAGAGAGAAAAGTGGAAAACTAGTGAAAAGTGGGAAATTGCAAATATGATTTTGTATGAGGCGTGCACAGGTAATAGGGGATTTGTTTTTGAACTGTACCTTGGTTTAGTGTTGGTTTGGTTTCATATTATGTACGTAATGTATGCAATTACAATGCAATGCTGGTCTCTTACCACTAAGGAAATTACTGAACCAATAGCCCGACTATACAATCAAGCTCTCAAGATACACAGTAATCTCCCAGAGTGGTCTCACTGTCGCATTGCACTCACACACTCAAATGCGCCGACTTACCCGAACTACATAAACAGCCACGCTGTTGCGTTTTATTTTCAGATTCTAAATAGCACTTCTCCCGACACACAATATAAGACCAGTACGCCTCACTAGGTCAGTCTCATATcatcacatatttcaaaaaggcaCACAAACCGTTCCCTCTCAACAGTTACACTTGCACTCATTGATTGTTCATGTATTGTCCAAGTCTTGcctgtattgttgtttttagttGTCTGCATctgtctagcccatgctaatgtcctgttcAAGTGTTTCTGTCTTCATGTACCATAACTGTGTTCTACGTTCTATTTTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151898 lncRNA upstream 19171 7013702 ~ 7015856 (+) True G112657
TU151894 lncRNA upstream 28063 7006746 ~ 7006964 (+) True G112653
TU151890 lncRNA upstream 29597 7004142 ~ 7005430 (+) True G112651
TU151892 lncRNA upstream 29636 7004142 ~ 7005391 (+) False G112651
TU151875 lncRNA upstream 68361 6966334 ~ 6966666 (+) True G112639
TU151918 lncRNA downstream 22727 7058427 ~ 7058752 (+) True G112674
TU151919 lncRNA downstream 40909 7076609 ~ 7081588 (+) True G112675
TU151931 lncRNA downstream 130462 7166162 ~ 7166365 (+) True G112686
TU152001 lncRNA downstream 699025 7734725 ~ 7735259 (+) True G112743
TU152005 lncRNA downstream 704181 7739881 ~ 7740113 (+) True G112747
XM_039816031.1 mRNA upstream 31994 6989501 ~ 7003033 (+) True rnf2
XM_039816032.1 mRNA upstream 31994 6989501 ~ 7003033 (+) False rnf2
XM_039815572.1 mRNA upstream 85897 6890987 ~ 6949130 (+) True LOC120568216
XM_039815571.1 mRNA upstream 85897 6890987 ~ 6949130 (+) False LOC120568216
XM_039816139.1 mRNA upstream 161213 6872325 ~ 6873814 (+) True LOC120568557
XM_039816756.1 mRNA downstream 352791 7388491 ~ 7466201 (+) True LOC120568979
XM_039816595.1 mRNA downstream 452773 7488473 ~ 7614340 (+) True LOC120568864
XM_039816597.1 mRNA downstream 452773 7488473 ~ 7598343 (+) False LOC120568864
XM_039816596.1 mRNA downstream 452773 7488473 ~ 7598306 (+) False LOC120568864
XM_039815475.1 mRNA downstream 594955 7630655 ~ 7730468 (+) True LOC120568159
TU151896 other upstream 25870 7007242 ~ 7009157 (+) True G112655
TU151756 other upstream 264115 6741101 ~ 6770912 (+) True G112562
TU151740 other upstream 434647 6577407 ~ 6600380 (+) False LOC120568552
TU151560 other upstream 713037 6251390 ~ 6321990 (+) True G112400
unassigned_transcript_536 other upstream 794124 6240822 ~ 6240903 (+) True trnas-uga_21
XR_005640625.1 other downstream 849798 7885498 ~ 7902287 (+) True dnai4
TU152240 other downstream 1274150 8309850 ~ 8313076 (+) True G112932
TU152286 other downstream 1371240 8406940 ~ 8454416 (+) False LOC120568257
TU152347 other downstream 1673629 8709329 ~ 8712997 (+) False atg10
TU152348 other downstream 1673629 8709329 ~ 8712997 (+) False atg10

Expression Profile