RNA id: TU152039


Basic Information

Item Value
RNA id TU152039
length 316
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G112775
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 7835603 ~ 7836850 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGAGCATCTTGTCTCTCTTTCCCTGGCTGCTGCTGATGAAGACAGATAGCACCATCACAGTCATCTGAACAATCCATGAGGCCATATTCCTCTCACTCTGCCTAGCTAGTTCGTTCTGACTTGGCGCAGTTGACAGTGAACCGTCGTGTCGAAGACTATTTCCCCGTCTATATGTGTTTCCCCCGACCTAAATCTGAATCAGACCATATCTCCAACCCTAACCACGGAGGAGGGCGCTACGAGAAACATCATTTTAACAGTAGGGGAACATTATTGGACGGGGGGACAGACTTACGTGCCCAGCTGTGGTGTAGCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU152007 lncRNA upstream 92302 7741695 ~ 7743301 (+) True G112749
TU152005 lncRNA upstream 95490 7739881 ~ 7740113 (+) True G112747
TU152001 lncRNA upstream 100344 7734725 ~ 7735259 (+) True G112743
TU151931 lncRNA upstream 669238 7166162 ~ 7166365 (+) True G112686
TU151919 lncRNA upstream 754015 7076609 ~ 7081588 (+) True G112675
TU152041 lncRNA downstream 18849 7855699 ~ 7855985 (+) True G112777
TU152044 lncRNA downstream 64630 7901480 ~ 7903922 (+) False dnai4
TU152063 lncRNA downstream 113420 7950270 ~ 7954676 (+) True G112796
TU152064 lncRNA downstream 127597 7964447 ~ 7966760 (+) True G112797
TU152065 lncRNA downstream 132660 7969510 ~ 7970134 (+) True G112798
XM_039814710.1 mRNA upstream 36112 7792663 ~ 7799491 (+) True LOC120567733
XM_039815476.1 mRNA upstream 105135 7630655 ~ 7730468 (+) False LOC120568159
XM_039814951.1 mRNA downstream 48648 7885498 ~ 7900818 (+) False dnai4
XM_039814949.1 mRNA downstream 49365 7886215 ~ 7900818 (+) False dnai4
XM_039814950.1 mRNA downstream 49365 7886215 ~ 7900818 (+) False dnai4
XM_039816763.1 mRNA downstream 207154 8044004 ~ 8062100 (+) True cdc14aa
XM_039816551.1 mRNA downstream 327556 8164406 ~ 8175954 (+) True blvra
TU151912 other upstream 799903 7035027 ~ 7035700 (+) True G112670
TU151896 other upstream 826446 7007242 ~ 7009157 (+) True G112655
TU151756 other upstream 1064691 6741101 ~ 6770912 (+) True G112562
TU151740 other upstream 1235223 6577407 ~ 6600380 (+) False LOC120568552
TU151560 other upstream 1513613 6251390 ~ 6321990 (+) True G112400
XR_005640625.1 other downstream 48648 7885498 ~ 7902287 (+) True dnai4
TU152240 other downstream 473000 8309850 ~ 8313076 (+) True G112932
TU152286 other downstream 570090 8406940 ~ 8454416 (+) False LOC120568257
TU152347 other downstream 872479 8709329 ~ 8712997 (+) False atg10
TU152348 other downstream 872479 8709329 ~ 8712997 (+) False atg10

Expression Profile