Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005640818.1 |
| length | 390 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 4 |
| gene id | LOC120569003 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 9037893 ~ 9046432 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU152539 | lncRNA | upstream | 28161 | 9009031 ~ 9009798 (+) | True | G113148 |
| XR_005640770.1 | lncRNA | upstream | 68111 | 8967470 ~ 8969848 (+) | False | LOC120568741 |
| TU152523 | lncRNA | upstream | 68172 | 8967289 ~ 8969787 (+) | True | LOC120568741 |
| XR_005640769.1 | lncRNA | upstream | 68762 | 8967470 ~ 8969197 (+) | False | LOC120568741 |
| TU152521 | lncRNA | upstream | 80687 | 8955878 ~ 8957272 (+) | True | G113131 |
| TU152638 | lncRNA | downstream | 106569 | 9153001 ~ 9162545 (+) | True | G113240 |
| TU152679 | lncRNA | downstream | 210891 | 9257323 ~ 9257583 (+) | True | G113273 |
| TU152680 | lncRNA | downstream | 222915 | 9269347 ~ 9269547 (+) | True | G113274 |
| TU152730 | lncRNA | downstream | 328017 | 9374449 ~ 9375105 (+) | True | G113290 |
| XR_005640716.1 | lncRNA | downstream | 420866 | 9467298 ~ 9469320 (+) | True | LOC120568401 |
| XM_039816786.1 | mRNA | upstream | 1265 | 9028557 ~ 9036694 (+) | False | odr4 |
| XM_039816787.1 | mRNA | upstream | 1265 | 9028578 ~ 9036694 (+) | True | odr4 |
| XM_039816790.1 | mRNA | upstream | 1265 | 9028590 ~ 9036694 (+) | False | odr4 |
| XM_039816788.1 | mRNA | upstream | 1265 | 9028763 ~ 9036694 (+) | False | odr4 |
| XM_039816141.1 | mRNA | upstream | 41803 | 8989441 ~ 8996156 (+) | True | prg4a |
| XM_039816792.1 | mRNA | downstream | 1734 | 9048166 ~ 9061933 (+) | False | dpydb |
| XM_039816791.1 | mRNA | downstream | 1738 | 9048170 ~ 9064521 (+) | True | dpydb |
| XM_039816606.1 | mRNA | downstream | 19153 | 9065585 ~ 9070253 (+) | True | LOC120568868 |
| XM_039816605.1 | mRNA | downstream | 19153 | 9065585 ~ 9070253 (+) | False | LOC120568868 |
| XM_039816607.1 | mRNA | downstream | 19153 | 9065585 ~ 9069887 (+) | False | LOC120568868 |
| TU152519 | other | upstream | 35391 | 9001890 ~ 9002568 (+) | True | G113130 |
| TU152498 | other | upstream | 136352 | 8895927 ~ 8901607 (+) | False | pdca |
| unassigned_transcript_548 | other | upstream | 143903 | 8893982 ~ 8894056 (+) | True | trnan-guu_7 |
| unassigned_transcript_546 | other | upstream | 147600 | 8890286 ~ 8890359 (+) | True | trnan-guu_5 |
| unassigned_transcript_545 | other | upstream | 155172 | 8882714 ~ 8882787 (+) | True | trnan-guu_4 |
| unassigned_transcript_550 | other | downstream | 491648 | 9538080 ~ 9538151 (+) | True | trnaq-cug_7 |
| unassigned_transcript_551 | other | downstream | 492244 | 9538676 ~ 9538747 (+) | True | trnaq-cug_8 |
| unassigned_transcript_552 | other | downstream | 492699 | 9539131 ~ 9539202 (+) | True | trnaq-cug_9 |
| unassigned_transcript_553 | other | downstream | 493448 | 9539880 ~ 9539951 (+) | True | trnaq-cug_10 |
| unassigned_transcript_554 | other | downstream | 494709 | 9541141 ~ 9541212 (+) | True | trnaq-cug_11 |
