Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005640617.1 |
| length | 544 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 3 |
| gene id | LOC120567814 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 9536637 ~ 9666053 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005640715.1 | lncRNA | downstream | 140261 | 9459503 ~ 9459924 (-) | True | LOC120568399 |
| TU152853 | lncRNA | downstream | 164992 | 9433642 ~ 9435193 (-) | True | G113364 |
| TU152852 | lncRNA | downstream | 165670 | 9433642 ~ 9434515 (-) | False | G113364 |
| XR_005640717.1 | lncRNA | downstream | 168571 | 9429413 ~ 9431614 (-) | True | LOC120568402 |
| XR_005640718.1 | lncRNA | downstream | 184364 | 9414769 ~ 9415821 (-) | True | LOC120568403 |
| TU152931 | lncRNA | upstream | 59581 | 9672452 ~ 9672672 (-) | True | G113426 |
| TU152946 | lncRNA | upstream | 209566 | 9822437 ~ 9823757 (-) | True | G113438 |
| TU152960 | lncRNA | upstream | 294053 | 9906924 ~ 9913482 (-) | False | LOC120567726 |
| XR_005640607.1 | lncRNA | upstream | 294101 | 9906972 ~ 9913666 (-) | True | LOC120567726 |
| TU152966 | lncRNA | upstream | 426786 | 10039657 ~ 10039885 (-) | True | G113457 |
| XM_039814856.1 | mRNA | downstream | 36444 | 9551992 ~ 9563741 (-) | False | fitm1l |
| XM_039814855.1 | mRNA | downstream | 41440 | 9551992 ~ 9558745 (-) | True | fitm1l |
| XM_039814857.1 | mRNA | downstream | 62623 | 9534265 ~ 9537562 (-) | True | ankrd45 |
| XM_039815912.1 | mRNA | downstream | 89688 | 9400787 ~ 9510497 (-) | True | LOC120568397 |
| XM_039815913.1 | mRNA | downstream | 89688 | 9493218 ~ 9510497 (-) | False | LOC120568397 |
| XM_039814914.1 | mRNA | upstream | 62013 | 9674884 ~ 9788220 (-) | False | map4l |
| XM_039814916.1 | mRNA | upstream | 62013 | 9674884 ~ 9788220 (-) | False | map4l |
| XM_039814913.1 | mRNA | upstream | 62013 | 9674884 ~ 9788220 (-) | True | map4l |
| XM_039814915.1 | mRNA | upstream | 62013 | 9674884 ~ 9788219 (-) | False | map4l |
| XM_039814917.1 | mRNA | upstream | 62013 | 9674884 ~ 9711321 (-) | False | map4l |
| TU152848 | other | downstream | 89704 | 9507048 ~ 9510481 (-) | False | LOC120568397 |
| TU152847 | other | downstream | 104433 | 9401742 ~ 9495752 (-) | False | LOC120568397 |
| TU152846 | other | downstream | 196573 | 9401742 ~ 9403612 (-) | False | LOC120568397 |
| unassigned_transcript_549 | other | downstream | 705062 | 8895050 ~ 8895123 (-) | True | trnan-guu_8 |
| unassigned_transcript_547 | other | downstream | 708181 | 8891931 ~ 8892004 (-) | True | trnan-guu_6 |
| TU153067 | other | upstream | 1274136 | 10887007 ~ 10888847 (-) | False | LOC120567758 |
| unassigned_transcript_557 | other | upstream | 1274218 | 10887089 ~ 10888952 (-) | True | LOC120567758 |
| TU153382 | other | upstream | 2605191 | 12218062 ~ 12218267 (-) | True | G113805 |
| TU153584 | other | upstream | 2988309 | 12601180 ~ 12602909 (-) | False | nedd8l |
| XR_005640810.1 | other | upstream | 3148044 | 12760915 ~ 12768625 (-) | False | LOC120568934 |
