RNA id: TU153770


Basic Information

Item Value
RNA id TU153770
length 450
RNA type TUCP
GC content 0.51
exon number 3
gene id ndufb3
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13123030 ~ 13125463 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TGCTGTGCCGTAATACAGCCGCAAAACAACGCTAGCTGTCGTAACATTTAGTCCAGTAACAGAGGTCACAACAAACCACACAGCATGGGAGGTGACCACGGCCACAACAAGATGTCCATGCCAGACTGGCGCCAGTGGAAGGCCGAGGGAACACCACTGGAGTTTACACAGCAGAGGCTGGCAGCCAGGGGCCTTAAGGATCCATGGGCACGCAACGAGGCTTGGAGATACTCAGGCGGCTTTGCTCGTGCTGTGACTCTGTCTGACGTGCTTCTGAGAGGATTCAAGTGGGGATTTGCTGCCTTTACTGTTGCTCTGGCTGTAGAGTATGCTCTGTTCCCACCCAAGAAGGGCGGCCACTAATGCTCATCATTGTCCCTCAAGCCCAGACCATAATGGCATCTAATAatattctgtattttctgttaaTTAAAGGTTTTTTTCTGATCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU153756 lncRNA upstream 48461 13010575 ~ 13074594 (+) False col6a1
TU153760 lncRNA upstream 94885 13027079 ~ 13028170 (+) True G114000
TU153732 lncRNA upstream 208834 12913617 ~ 12914221 (+) False LOC120567760
TU153729 lncRNA upstream 215943 12906596 ~ 12907112 (+) False LOC120568152
TU153701 lncRNA upstream 248745 12861625 ~ 12874310 (+) True G113956
TU153769 lncRNA downstream 26636 13152099 ~ 13153594 (+) True G114008
TU153788 lncRNA downstream 57876 13183339 ~ 13186363 (+) False si:ch73-71c20.5
TU153799 lncRNA downstream 70798 13196261 ~ 13198734 (+) True G114033
TU153802 lncRNA downstream 74305 13199768 ~ 13200746 (+) True G114035
TU153804 lncRNA downstream 79362 13204825 ~ 13207023 (+) True G114037
XM_039815659.1 mRNA upstream 382 13118569 ~ 13122673 (+) True pecr
XM_039815661.1 mRNA upstream 5704 13114596 ~ 13117351 (+) True rpl37a
XM_039815655.1 mRNA upstream 10791 13106699 ~ 13112264 (+) True orc2
XM_039815656.1 mRNA upstream 10791 13106699 ~ 13112264 (+) False orc2
XM_039815654.1 mRNA upstream 17254 13101402 ~ 13105801 (+) True zgc:162816
XM_039817023.1 mRNA downstream 33553 13159016 ~ 13163518 (+) True si:ch211-227n13.3
XM_039817024.1 mRNA downstream 38376 13163839 ~ 13166831 (+) True LOC120569132
XM_039816866.1 mRNA downstream 51362 13176825 ~ 13183207 (+) True mcm6
XM_039816320.1 mRNA downstream 57821 13183284 ~ 13186364 (+) True si:ch73-71c20.5
XM_039816336.1 mRNA downstream 87853 13213316 ~ 13223854 (+) False LOC120568679
TU153768 other upstream 5699 13114649 ~ 13117356 (+) False rpl37a
TU153727 other upstream 147418 12929215 ~ 12975637 (+) True G113979
TU153737 other upstream 165699 12952580 ~ 12957356 (+) False LOC120569010
TU153451 other upstream 535892 12582642 ~ 12587163 (+) False ap1g2
TU153339 other upstream 962800 12157451 ~ 12160255 (+) False LOC120568189
unassigned_transcript_558 other downstream 92676 13218139 ~ 13218210 (+) True trnae-cuc_17
TU154336 other downstream 1161687 14287150 ~ 14295268 (+) False LOC120568245
TU154337 other downstream 1162892 14288355 ~ 14290960 (+) False LOC120568245
TU154338 other downstream 1164074 14289537 ~ 14295993 (+) False LOC120568245
TU154339 other downstream 1167297 14292760 ~ 14295268 (+) False LOC120568245

Expression Profile