Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU154011 |
| length | 605 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 3 |
| gene id | G114177 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 13176803 ~ 13177751 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | description |
|---|---|
| ko03460 | Fanconi anemia pathway |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU153937 | lncRNA | downstream | 9097 | 13072245 ~ 13167706 (-) | True | G114129 |
| TU153934 | lncRNA | downstream | 11968 | 13095333 ~ 13164835 (-) | False | G114129 |
| TU153994 | lncRNA | downstream | 59353 | 13114645 ~ 13117450 (-) | False | G114166 |
| TU153995 | lncRNA | downstream | 59353 | 13114645 ~ 13117450 (-) | True | G114166 |
| TU153981 | lncRNA | downstream | 72406 | 13103242 ~ 13104397 (-) | True | G114159 |
| TU154019 | lncRNA | upstream | 19994 | 13197745 ~ 13223865 (-) | False | G114183 |
| TU154021 | lncRNA | upstream | 41526 | 13219277 ~ 13223865 (-) | True | G114183 |
| TU154040 | lncRNA | upstream | 103180 | 13280931 ~ 13286164 (-) | True | G114196 |
| TU154045 | lncRNA | upstream | 108900 | 13286651 ~ 13287220 (-) | True | G114199 |
| TU154049 | lncRNA | upstream | 110431 | 13288182 ~ 13288993 (-) | True | G114202 |
| XM_039815657.1 | mRNA | downstream | 18513 | 13152095 ~ 13158290 (-) | True | LOC120568263 |
| XM_039815658.1 | mRNA | downstream | 25325 | 13132932 ~ 13151478 (-) | True | LOC120568264 |
| XM_039815660.1 | mRNA | downstream | 61514 | 13112363 ~ 13115289 (-) | True | cfap410 |
| XM_039816177.1 | mRNA | downstream | 201475 | 12966466 ~ 12975328 (-) | True | LOC120568578 |
| XM_039815915.1 | mRNA | downstream | 232085 | 12931398 ~ 12944718 (-) | True | xirp1 |
| XM_039816319.1 | mRNA | upstream | 8503 | 13186254 ~ 13195957 (-) | True | tmbim1a |
| XM_039816525.1 | mRNA | upstream | 18988 | 13196739 ~ 13207620 (-) | True | casp8 |
| XM_039816524.1 | mRNA | upstream | 18988 | 13196739 ~ 13206963 (-) | False | casp8 |
| XM_039816526.1 | mRNA | upstream | 18988 | 13196739 ~ 13206226 (-) | False | casp8 |
| XM_039816340.1 | mRNA | upstream | 30279 | 13208030 ~ 13214290 (-) | False | LOC120568680 |
| TU153973 | other | downstream | 88240 | 13084561 ~ 13088563 (-) | True | G114152 |
| XR_005640810.1 | other | downstream | 408178 | 12760915 ~ 12768625 (-) | False | LOC120568934 |
| TU153584 | other | downstream | 573894 | 12601180 ~ 12602909 (-) | False | nedd8l |
| TU153382 | other | downstream | 958536 | 12218062 ~ 12218267 (-) | True | G113805 |
| unassigned_transcript_557 | other | downstream | 2287851 | 10887089 ~ 10888952 (-) | True | LOC120567758 |
| TU154602 | other | upstream | 1435862 | 14613613 ~ 14615772 (-) | False | LOC120568687 |
| TU154687 | other | upstream | 1618167 | 14795918 ~ 14797044 (-) | True | G114680 |
| XR_005640598.1 | other | upstream | 2112435 | 15290186 ~ 15304610 (-) | False | mfsd8l2 |
| XR_005640597.1 | other | upstream | 2112435 | 15290186 ~ 15304610 (-) | False | mfsd8l2 |
| XR_005640842.1 | other | upstream | 2233411 | 15411162 ~ 15411347 (-) | True | LOC120569139 |
