RNA id: TU154064


Basic Information

Item Value
RNA id TU154064
length 2821
lncRNA type sense_over
GC content 0.37
exon number 1
gene id dis3l2
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13469531 ~ 13482225 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gttaggatgGTTAGAAGGTGTCTTTGACCAAGCAAGTTGACCGTGTAAATTGCAATAATCATTTCTTGTTTTCACTTACAGGTTATTTCAATCTTCACGTTAGTGGAGGTGCTGCTGAAAGCGGACGGTGCACCCATGAAATACAGCGCGGTGCTCAAGAGGCCTGAGGAGAACGAATCATAAACACTTAAAACTGAATTGCACAtatgcttttgttgtttggtggtagtagtagtagtttagaAGCAGAATTTCTGTGGTAAGCAGGAAAATCACTGATCAGGTCAGAGTCAGATTTCAATGGAAATTCCCACTACAAGTTTCAGTCTTAACCAAAAGGCCCATCCCAGTGTGTTTTATATGTTCGCCCACTTACTGCAATTAACCCACATGCACGTACATGACGGCTGCCCTTTTCCAAGGTATATTATGTGTTGGGAAAGGAACTTTGCTTCCAGCTTTTCTTTGGTTTCCTTTTAATTTACGTAATACATGCAAGGGAAGTCCACATCTATAGACATGCAACAAGGACCCATCCCAGGTAGAAGGCACAAAAGGCAAGTTCACGGTTTTAGGATAATTTTTTAGGTCTTTAATTACCTTTTTATTATAGAGCAGCTGGAGAATGACTGGGTTGGATTCGAACCCCTGCCGCGGCCAAAGACTACACGGAGTCCACGCTTTAACGAGTGAGTTAGTGGTCGCCCTCAGAAATAGTGGGGAGGGAGGCAATATTAGtcgaaggaagaaagaaagaagcagagaaaaataattaaacaacAAATAGATCTTTGTGGGCATCTCTGGTTGGGCCAAACGACAGAGGATAGCGAGACGCAAGGGCGGATCCAGGGTTGGAGATTTTGGGATAGCTGGGTCAATTTTTTATCATTCCCCTCCAAATTTGCTATACTAATAATACTAGTCTAGCTCCAAAATGTAAAGGGTTCTTCCTTGACTCATGCTACacgggccagtagtttttccctGAAAGTACTAACAGAAACTAAACCAAAAACATAACCTCTCTGGAAGAGAGATGACCATCTTGAAAGtataaaatctttttttgacaaaaaaaccCAACCCATAAATACATACATGGTATGCTTTGGAAAATGGTTGACCGTGTGACGTTGGACATATGATTCATAGTGAGTGGTTAAAAACTtgaaacattttgtattttaagcCTTAATGATCTCACTAATGGGCACATTATTGTATGTAATTCAGTGGATGGATTTCAAATTGAACTGTGAATCAGGTCTGACCGTGAAAGAACCAAGGCagcaattagttttattttgctgttgATTAATTGACCTTTATGAGGACCGTTTTCATGTTACATAACTGTTGTACACAGTCTAATGTTTGAAAGCTGATTTTCAGTTTAATATTAATGCCTGATTCAAGATTGAGGAGAGAGACTTTATTTTTGAGTTTTTAAAGCAATAGAATTCAATACACTACTGAATTTTACTTATTTGGTTGTCTTTGACTGgctatggttgctgtaattTAACTTGTTGTGGCTAGAGTGAAGCTATttggaccaaactgtaaaatTCAGCAAAGTAAAACCTTTGACTACAGCAGATTGAATGAACGGTTATATTCACGTCTGCATAGAAACAAAAgctaaacaaaagaaaatccacAACCACATGCCATCCTGGACTTTTTACATTGCCGAATGTATTTATAGTGTTTTATATTTGGAAGATTTTCCAGATTTTTCTGGGGTGTGAATGAAAGGGCTGAAGGGCCTCCTCAGGTCCTTTATGTCACAGTCATGAAGTAAAGCTCGTAGAACCTTTAATTTGATTTATATTCTTAAAAGCAGGGTCTCAGGATCTAACATATTGTTTTAGTCTAAACTGAGgcacattttctgtattttgtgtgcaaGACAGGCCCAAGTGTAATTATTTCTCAAATCATTGTTTTTAATACAAAACATTGGAATGACTTGAATGAGAATTGCTGCTGAAGTTATTGGTGGCCTTGAGTTCTTAATGGATTTTATGTTAGCTATTGTGCTTTAAGTGCTTCCAACTGTTGTAGGGTCTTTTTGTGCTCAGACTTGATTTGTGACACATTTAAAAGGACCTCTTTAATATCGACTGAATATCAGCCTTAATTTAATCAAGCaaagattaaataaaatgttagtgAAGCTGCACATTTTAAGTGTTTGTGGGCCTCCCTTTTGCTTCAATTGAGTCAATGTGCCTCTCTTTAGTTCTCAGTGCCATGAAGTGTCATACAAATGAGCTGCTACGTCTGCacagtgttttgttttatttataaatcTCTTTTGTTTGACGGATTGCTTTTAGGCTTGTCAGATTTTTGGAAGACCATTAGCTAATGATTttaagttattttgttttacatgGACTGAGATGTTTGAAACATGggctttaaatgtattttaaaccaGCAAGTTTCTGTAAGTACTAGTGCAAAACAACTGTACTCACTTAGTAGGATGTGTTTCTGTGATCAGGATTTAAAAGAGGAAGAATTTCTCACGTCACATTTGACAACCTCAGAATGCAGCAAAGTTATATTGTGACATGTAACTTTGATTCTGGTCAGTATTCTTTTGTACTCTGCTTAAGCACCATAAAGAGTAATAGATGTTTATCCTTGTCTCTAgggaaataaatacatacatgtatgactgaaactgttttttttttattttcctgaaTCCTACTTTAAACCTAACTAGTGGTCACTGAAGATGAAAAGGAAACAAATTCTACTCAAACACAAAGTAGTGATCTGTGCTGCCAGTGACATAATTACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU154072 lncRNA downstream 62701 13405234 ~ 13406830 (-) False G114215
TU154070 lncRNA downstream 63371 13394461 ~ 13406160 (-) True G114215
TU154071 lncRNA downstream 73163 13394461 ~ 13396368 (-) False G114215
TU154049 lncRNA downstream 180538 13288182 ~ 13288993 (-) True G114202
TU154045 lncRNA downstream 182311 13286651 ~ 13287220 (-) True G114199
TU154088 lncRNA upstream 60787 13533138 ~ 13549466 (-) True LOC120568710
XR_005640752.1 lncRNA upstream 64123 13536474 ~ 13549442 (-) False LOC120568710
TU154108 lncRNA upstream 84253 13556604 ~ 13564803 (-) True G114247
TU154127 lncRNA upstream 150552 13622903 ~ 13625479 (-) True G114256
TU154129 lncRNA upstream 153425 13625776 ~ 13628667 (-) True G114257
XM_039816179.1 mRNA downstream 3821 13440689 ~ 13465710 (-) True LOC120568580
XM_039816491.1 mRNA downstream 32082 13421548 ~ 13437449 (-) False LOC120568786
XM_039816490.1 mRNA downstream 32083 13421548 ~ 13437448 (-) False LOC120568786
XM_039816489.1 mRNA downstream 32084 13421548 ~ 13437447 (-) True LOC120568786
XM_039815498.1 mRNA downstream 107489 13354229 ~ 13362042 (-) True LOC120568167
XM_039815730.1 mRNA upstream 96998 13569349 ~ 13575574 (-) True si:ch211-252f13.5
XM_039816531.1 mRNA upstream 122827 13595178 ~ 13619698 (-) False LOC120568814
XM_039816529.1 mRNA upstream 122827 13595178 ~ 13619698 (-) False LOC120568814
XM_039816527.1 mRNA upstream 122827 13595178 ~ 13619698 (-) True LOC120568814
XM_039816528.1 mRNA upstream 122827 13595178 ~ 13619697 (-) False LOC120568814
TU153973 other downstream 380968 13084561 ~ 13088563 (-) True G114152
XR_005640810.1 other downstream 700906 12760915 ~ 12768625 (-) False LOC120568934
TU153584 other downstream 866622 12601180 ~ 12602909 (-) False nedd8l
TU153382 other downstream 1251264 12218062 ~ 12218267 (-) True G113805
unassigned_transcript_557 other downstream 2580579 10887089 ~ 10888952 (-) True LOC120567758
TU154602 other upstream 1141262 14613613 ~ 14615772 (-) False LOC120568687
TU154687 other upstream 1323567 14795918 ~ 14797044 (-) True G114680
XR_005640598.1 other upstream 1817835 15290186 ~ 15304610 (-) False mfsd8l2
XR_005640597.1 other upstream 1817835 15290186 ~ 15304610 (-) False mfsd8l2
XR_005640842.1 other upstream 1938811 15411162 ~ 15411347 (-) True LOC120569139

Expression Profile