RNA id: TU155017


Basic Information

Item Value
RNA id TU155017
length 1037
RNA type TUCP
GC content 0.43
exon number 4
gene id asip2b
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 15472702 ~ 15478462 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCCTCACAACCAGAAAGAAGCACGAGGGAGCTGAAGTGAGGGGTTTAGAGCTGAAGTGAGGGGTTTAAAGGAGAATAAATCTCATCATCATTATGAGGACGATCAACCACTGGTTGTGCTTCTTCCTGCTTGCCTTCCCGCTTTCCTGGGCAGAGGACACGAAGAAAGATGTGAGGAAGACTGAGAATGACACAGTTTGGAGCCAAGCGAAGGCCAGACAACTGTTTGCAAGGAGAAAGATTTCTCCGCCACAGGAAAGTAACACTACTAAACACAAGTCAAACCTAATGTCCCCAGCACGTCGCTGCGGCCGCCTGATGGAAAGCTGCTCCGCCCACGTCCTGTGCTGCGACCCCTGCGCCTCCTGCCGCTGTCGACTCTTCAACACCATCTGTCATTGCTGGAGGATGAACCCGCTGTGCTTAAAGAAGACGTAGATGGAGCACAAAACCCACACGTGCACAGACAAAGCCCAGCACCAGGACATATACAGTGATAGACATATATACGCATACAAATACATATACACTGCCTTCTAGCCTGTGGGTGCAGCTCAGAGAATAttagaaacatttgaaaaatcatgaaaaaatttaagtatttccattgTCTGTGGCTTCAACACTTGAGTGATGGACGGGGACATGGAAATGAAAGGGTGAAGCCTGTATTTTTCTGTCTTCTGAGGCTTGAATAAGAAATACTCACATAAATGTTTACATAATATCCAAACACCCAACATGTGTAACAACATATGGGTGACATATGCTTTTTCATGTATGTAGACAATCAACGTGTAAACTGTGTGTTGTGCCTTGGTTATTTCGCGCTATTGCTGCTTTTGAATATCTTTATCACTTCTGCTCTCCTGCCATACTAAGCATATGGTAACCTATAATAACCAggtttagatttatttttttaaccttactACCGTACAGACTAAATgtggaaataaataaagcaaaatCATATGTTTTGAGCCATCAACGGTTAAAAAACAGATTGTTCCTTTCCTATGTAAAAGAAATATGACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU155002 lncRNA upstream 17368 15444478 ~ 15455375 (+) True G114909
TU154995 lncRNA upstream 34990 15436104 ~ 15437753 (+) True G114905
TU154994 lncRNA upstream 39799 15432671 ~ 15432944 (+) True G114904
TU154979 lncRNA upstream 54695 15416732 ~ 15418048 (+) True G114889
TU154948 lncRNA upstream 103970 15366957 ~ 15368773 (+) False LOC120568540
TU155048 lncRNA downstream 70785 15549129 ~ 15549920 (+) True G114944
TU155046 lncRNA downstream 70962 15549306 ~ 15549920 (+) False G114944
TU155054 lncRNA downstream 88050 15566394 ~ 15568494 (+) False slc35a3b
TU155105 lncRNA downstream 146758 15625102 ~ 15625323 (+) True G114991
TU155115 lncRNA downstream 198749 15677093 ~ 15677343 (+) True G114998
XM_039816196.1 mRNA upstream 40969 15421740 ~ 15431774 (+) True ccdc39
XM_039816566.1 mRNA upstream 51585 15418264 ~ 15421158 (+) True dcun1d1
XM_039816671.1 mRNA upstream 90413 15375813 ~ 15382330 (+) True b3gnt5b
XM_039816111.1 mRNA upstream 103963 15338557 ~ 15368780 (+) False LOC120568540
XM_039816109.1 mRNA upstream 103963 15338990 ~ 15368780 (+) True LOC120568540
XM_039815636.1 mRNA downstream 1684 15480028 ~ 15483769 (+) True LOC120568251
XM_039815637.1 mRNA downstream 42438 15520782 ~ 15528442 (+) True zgc:153115
XM_039816218.1 mRNA downstream 56313 15534657 ~ 15536850 (+) True tsen15
XM_039816217.1 mRNA downstream 68445 15546789 ~ 15548920 (+) True sec22ba
XM_039814631.1 mRNA downstream 76127 15554471 ~ 15567869 (+) True slc35a3b
TU154847 other upstream 315544 15151796 ~ 15157199 (+) True G114789
TU154338 other upstream 1176750 14289537 ~ 14295993 (+) False LOC120568245
TU154336 other upstream 1177475 14287150 ~ 14295268 (+) False LOC120568245
TU154339 other upstream 1177475 14292760 ~ 14295268 (+) False LOC120568245
TU154337 other upstream 1181783 14288355 ~ 14290960 (+) False LOC120568245
TU155036 other downstream 42455 15520799 ~ 15528769 (+) False zgc:153115
XR_005640849.1 other downstream 243795 15722139 ~ 15722248 (+) True LOC120569147
XR_005640848.1 other downstream 244163 15722507 ~ 15722573 (+) True LOC120569146
XR_005640846.1 other downstream 244791 15723135 ~ 15723203 (+) True LOC120569144
XR_005640847.1 other downstream 245385 15723729 ~ 15723797 (+) True LOC120569145

Expression Profile