RNA id: TU155651



Basic Information


Item Value
RNA id TU155651
length 894
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G115391
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 17036866 ~ 17039107 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TGCTTTACATAACCACTTTTTGCTTTAATGATTACAATCAAAAACATTTGTACAACATTTTCAACATTAGAAAATGGATGCAGAGTTTTTTGGCTGACAGTGACCGCTATGAAAACAAACTGAGGGACAGAGAAGTGGGTACTGCGTGGAGATGAAGTAGAAAAAGAGCTGTATATATTGGAAGGACCAAACAGCTGGTGATGTATCAGAAGAAACGTCCATGTTCACTTATCCATTTTCGGAGCATATGTATTATAGACATGACATTTCTCTGATCTCTTGTTATTAAAACAGAGAAGGACTCGTTGCCTATATATGGGAGCTGCATAATGAGAAGCTAAGATGCATCAAGCCACTACTATCTCTGGCCTTAGTTACGGTAGTCGTTATTACCGAGcacaagaaaacattttttctgaTACACCCAAATGAAGTTCTGTGTTTTGCATCAGTGCCGAGCACAGAGACGGAGGTGGGGTGGATTGTGGGAAATATAAGACAAGGGAACTGCCactcatccttttttttttttttttatcaaacacaaagaaaatagGAAATACTAATAAATAACAGTGGAATCAGAGCCATAAATAGACAGTATTGGATATTTAGGACCCTGGAGGGGTGGAGTCAGCTGAGGTGAAGGAGAACTGGCAGCTAGCCTTCAAGTAACGGGATATCCCAGTGCagtgtcctgtgtgttgattGGGCGGCTCTACATCATGGAACAGGGCGTTTTTCCTGGCTGCACGCCGCCGTCCATCTTCTCTGCCTCCAGGATCATCCTCCGGAAAACCTCCACGGCcgtCTGGTTCTCTTTAGCTGAGGACTCCATGAAGGCAGCGTTCCAGGAATCGGCTAAGGCTTTTCCTTCTTCACAACTGATTActc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005640831.1 lncRNA downstream 212206 16823302 ~ 16824660 (-) True LOC120569046
TU155549 lncRNA downstream 285591 16750900 ~ 16751275 (-) True G115331
TU155540 lncRNA downstream 421941 16613028 ~ 16614925 (-) True G115323
TU155522 lncRNA downstream 476393 16558268 ~ 16560473 (-) False G115309
TU155520 lncRNA downstream 478668 16543613 ~ 16558198 (-) True G115309
TU155697 lncRNA upstream 73609 17112716 ~ 17114744 (-) True G115428
TU155698 lncRNA upstream 80814 17119921 ~ 17121046 (-) True G115429
TU155699 lncRNA upstream 83615 17122722 ~ 17123058 (-) True G115430
TU155702 lncRNA upstream 94766 17133873 ~ 17135813 (-) True G115433
TU155703 lncRNA upstream 98647 17137754 ~ 17139518 (-) True G115434
XM_039814640.1 mRNA downstream 14473 17020735 ~ 17022393 (-) True LOC120567671
XM_039815850.1 mRNA downstream 21240 16847810 ~ 17015626 (-) False LOC120568369
XM_039815847.1 mRNA downstream 21240 16847810 ~ 17015626 (-) False LOC120568369
XM_039815846.1 mRNA downstream 21240 16847810 ~ 17015626 (-) False LOC120568369
XM_039815845.1 mRNA downstream 21240 16847810 ~ 17015626 (-) False LOC120568369
XM_039814525.1 mRNA upstream 697 17039804 ~ 17041463 (-) False ly97.3
XM_039816998.1 mRNA upstream 126784 17165891 ~ 17176411 (-) True LOC120569119
XM_039816565.1 mRNA upstream 144055 17183162 ~ 17275789 (-) True LOC120568842
XM_039814936.1 mRNA upstream 257948 17297055 ~ 17298924 (-) True LOC120567855
XM_039816885.1 mRNA upstream 453180 17492287 ~ 17542090 (-) True LOC120569062
XR_005640632.1 other downstream 234602 16756331 ~ 16802264 (-) False epb41l3b
TU155525 other downstream 397054 16637108 ~ 16639812 (-) True G115312
TU155443 other downstream 700934 16330953 ~ 16335932 (-) True LOC120568735
XR_005640639.1 other downstream 835609 16182654 ~ 16201257 (-) False cc2d1b
TU155670 other upstream 693 17039800 ~ 17041476 (-) True ly97.3
TU155671 other upstream 693 17039800 ~ 17108904 (-) False ly97.3
TU155672 other upstream 4019 17043126 ~ 17045062 (-) True G115406
XR_005640621.1 other upstream 1444049 18483156 ~ 18494488 (-) False sppl2
TU156258 other upstream 1677775 18716882 ~ 18718544 (-) True LOC120568909

Expression Profile