RNA id: TU155697



Basic Information


Item Value
RNA id TU155697
length 326
lncRNA type inter_gene
GC content 0.52
exon number 2
gene id G115428
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 17112716 ~ 17114744 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GCCAGTCATTGCCTGTGTGAATCTTGATAATGCCGTGTTCAATCATGTCCTGCAGGTAGGCAAAGCCTCCCCAGATATACTTCTGGTCCTCTATGGGGTCTGCTCTGGGGCCAGGGTCCCAGTACCTGTCTTTGATCTTGTTGGTGCGTTCCACTGCGTCAATGTCCATGCGGATCTTGTATTTGACATGCGGGGGTACACTTGTGGTCCAGGGAAACATGTCCATGAAGACCACGCCTGCCCAAAACTTGTTCTCCTCCAGCAGGTACAAGGCCTGATGGGTCATCTGGGACTCATCCGTGTAAGCCACAAACTTATCCAGATTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU155651 lncRNA downstream 73609 17036866 ~ 17039107 (-) True G115391
XR_005640831.1 lncRNA downstream 288056 16823302 ~ 16824660 (-) True LOC120569046
TU155549 lncRNA downstream 361441 16750900 ~ 16751275 (-) True G115331
TU155540 lncRNA downstream 497791 16613028 ~ 16614925 (-) True G115323
TU155522 lncRNA downstream 552243 16558268 ~ 16560473 (-) False G115309
TU155698 lncRNA upstream 5177 17119921 ~ 17121046 (-) True G115429
TU155699 lncRNA upstream 7978 17122722 ~ 17123058 (-) True G115430
TU155702 lncRNA upstream 19129 17133873 ~ 17135813 (-) True G115433
TU155703 lncRNA upstream 23010 17137754 ~ 17139518 (-) True G115434
TU155704 lncRNA upstream 23010 17137754 ~ 17141217 (-) False G115434
XM_039814525.1 mRNA downstream 71253 17039804 ~ 17041463 (-) False ly97.3
XM_039814640.1 mRNA downstream 90323 17020735 ~ 17022393 (-) True LOC120567671
XM_039815844.1 mRNA downstream 97090 16847810 ~ 17015626 (-) True LOC120568369
XM_039816998.1 mRNA upstream 51147 17165891 ~ 17176411 (-) True LOC120569119
XM_039816565.1 mRNA upstream 68418 17183162 ~ 17275789 (-) True LOC120568842
XM_039814936.1 mRNA upstream 182311 17297055 ~ 17298924 (-) True LOC120567855
XM_039816885.1 mRNA upstream 377543 17492287 ~ 17542090 (-) True LOC120569062
XM_039816886.1 mRNA upstream 377543 17492287 ~ 17542089 (-) False LOC120569062
TU155671 other downstream 3812 17039800 ~ 17108904 (-) False ly97.3
TU155672 other downstream 67654 17043126 ~ 17045062 (-) True G115406
TU155670 other downstream 71240 17039800 ~ 17041476 (-) True ly97.3
XR_005640632.1 other downstream 310452 16756331 ~ 16802264 (-) False epb41l3b
TU155525 other downstream 472904 16637108 ~ 16639812 (-) True G115312
XR_005640621.1 other upstream 1368412 18483156 ~ 18494488 (-) False sppl2
TU156258 other upstream 1602138 18716882 ~ 18718544 (-) True LOC120568909
TU156342 other upstream 1730161 18844905 ~ 18846277 (-) True G115941
TU156358 other upstream 1817230 18931974 ~ 18935477 (-) True LOC120568972
TU156517 other upstream 2107047 19221791 ~ 19222726 (-) True G116084

Expression Profile