RNA id: TU155715



Basic Information


Item Value
RNA id TU155715
length 217
lncRNA type inter_gene
GC content 0.61
exon number 4
gene id G115445
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 17204663 ~ 17210211 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GTCTCCTTTCTGGCCAAACATACCCTGCTGTCCTCTCGGTCCAGACTCACCATCACTGCCAGCTGGACCGGGAGCTCCGACCACACCCTGAAGACCGCTTGGGCCTGGTGGACCAAGTTCACCCTTGTCTCCTTTGCTTCCCTTCTGTCCAGGTCCGCCAACTTCTCCCTTGTCACCGTCCTCTCCAGGGGGACCCTGAGGACCAGCCGGACCAGGA

Function


GO: NA

KEGG:

id description
ko05322 Systemic lupus erythematosus

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU155712 lncRNA upstream 18010 17183152 ~ 17186653 (+) True G115442
TU155707 lncRNA upstream 34845 17168573 ~ 17169818 (+) True G115437
TU155669 lncRNA upstream 46463 17157628 ~ 17158200 (+) True G115404
TU155573 lncRNA upstream 382987 16760435 ~ 16821676 (+) True G115350
TU155499 lncRNA upstream 592457 16610644 ~ 16612206 (+) False LOC120568363
TU155716 lncRNA downstream 7699 17217910 ~ 17224738 (+) True G115446
TU155763 lncRNA downstream 274195 17484406 ~ 17484811 (+) True G115488
TU155782 lncRNA downstream 347714 17557925 ~ 17559880 (+) True G115506
TU155789 lncRNA downstream 355044 17565255 ~ 17565482 (+) True G115513
TU155792 lncRNA downstream 368699 17578910 ~ 17579589 (+) True G115516
XM_039815706.1 mRNA upstream 65117 17097270 ~ 17139546 (+) True LOC120568298
XM_039816268.1 mRNA upstream 108839 17064933 ~ 17095824 (+) True LOC120568635
XM_039816711.1 mRNA downstream 106902 17317113 ~ 17325659 (+) True amy2a
XM_039816209.1 mRNA downstream 196286 17406497 ~ 17483553 (+) True LOC120568596
XM_039816889.1 mRNA downstream 333459 17543670 ~ 17552930 (+) False dcaf8
XM_039816890.1 mRNA downstream 333757 17543968 ~ 17552930 (+) True dcaf8
XM_039815471.1 mRNA downstream 361366 17571577 ~ 17574473 (+) False lrrc42
XR_005640725.1 other upstream 678234 16439025 ~ 16526429 (+) False LOC120568419
XR_005640724.1 other upstream 678235 16439025 ~ 16526428 (+) False LOC120568419
TU155276 other upstream 976141 16226307 ~ 16228522 (+) False LOC120568164
TU155130 other upstream 1404170 15764698 ~ 15800493 (+) False st6galnac3
XR_005640847.1 other upstream 1480866 15723729 ~ 15723797 (+) True LOC120569145
TU155758 other downstream 197280 17407491 ~ 17440463 (+) False LOC120568596
TU155940 other downstream 817069 18027280 ~ 18029895 (+) True LOC120567767
TU156065 other downstream 1094938 18305149 ~ 18354344 (+) True G115729
TU156233 other downstream 1462351 18672562 ~ 18674062 (+) False LOC120568691
TU156400 other downstream 1806847 19017058 ~ 19018726 (+) False LOC120568770

Expression Profile