RNA id: TU155850



Basic Information


Item Value
RNA id TU155850
length 663
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G115570
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 17573463 ~ 17574125 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TCACACTGTAAGCATGGAGCCTTTCATGGCAGTTGTCTGCTTTGCCTAGTTAGTTATCCAGTATTTATGTAATTGGTCTTTCAGCATTGCCATACTAGGTCTGATGAGCACACTTGTCTAACAATCATATCATCTAGGTTGTTTCCAAATACCATGTCAAGCAAGAAATTGGACACATACAAAATACTAAACtctatttctaaaaaaaaaaaatatatatatatatataaacgtcACCTATATCCTAGAAAAAGTGTTTACAGTTCCCCAGTGTAAATCATCTTGGAAATATTCTTGTTCATTTGAGCCGTAATGTTACAGCTTTAACAACATACTCAAGTTGCTATTTGTGGAATGCTACATGGACACATACCTCAATAGCTATTCAACAAGTCCATGTCCTCTGCAGTAAGAGCTGATGAGGACAAACGTTTTGTTGGAGGACTTTGATGTGAACTGTCACACCTTTCCGACTGACGCTGCCTTTTTTTGATATTGTTCCAGGCAGGCTTTGCTTGATCATTTGTTGTGGAAGGAGTTTGTTTCTCTGGTATGTGATGGTTTGCTGCAGGTCTGAAGAAatgcagtctctctctcttggtctCTTCCTCGCTCTCACATACCAAGGGTGCTGCATTCAGGACTTCTCTGACAAACTTCTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU155848 lncRNA downstream 334 17572897 ~ 17573129 (-) True G115568
TU155842 lncRNA downstream 20513 17548220 ~ 17552950 (-) True G115563
XR_005640743.1 lncRNA downstream 216254 17356351 ~ 17357209 (-) True LOC120568661
TU155728 lncRNA downstream 270905 17302264 ~ 17302558 (-) True G115458
TU155705 lncRNA downstream 408768 17164369 ~ 17164695 (-) True G115435
TU155864 lncRNA upstream 33331 17607456 ~ 17608257 (-) True G115577
TU155934 lncRNA upstream 391688 17965813 ~ 17967692 (-) True G115624
TU155949 lncRNA upstream 478859 18052984 ~ 18058106 (-) True LOC120568693
TU155961 lncRNA upstream 500943 18075068 ~ 18076412 (-) True G115640
TU155962 lncRNA upstream 502415 18076540 ~ 18077059 (-) True G115641
XM_039815473.1 mRNA downstream 2075 17567352 ~ 17571388 (-) True yipf1
XM_039815474.1 mRNA downstream 6417 17564711 ~ 17567046 (-) True zgc:113691
XM_039816892.1 mRNA downstream 8926 17555980 ~ 17564537 (-) False ndc1
XM_039816891.1 mRNA downstream 8926 17555980 ~ 17564537 (-) True ndc1
XM_039816887.1 mRNA downstream 31375 17492287 ~ 17542088 (-) False LOC120569062
XM_039815472.1 mRNA upstream 1181 17575306 ~ 17579575 (-) True tmem59
XM_039814559.1 mRNA upstream 9665 17583790 ~ 17591365 (-) True cdcp2
XM_039815773.1 mRNA upstream 425775 17999900 ~ 18019896 (-) False ranbp3b
XM_039815768.1 mRNA upstream 425775 17999900 ~ 18019896 (-) False ranbp3b
XM_039815771.1 mRNA upstream 425775 17999900 ~ 18019515 (-) False ranbp3b
TU155671 other downstream 464559 17039800 ~ 17108904 (-) False ly97.3
TU155672 other downstream 528401 17043126 ~ 17045062 (-) True G115406
TU155670 other downstream 531987 17039800 ~ 17041476 (-) True ly97.3
XR_005640632.1 other downstream 771199 16756331 ~ 16802264 (-) False epb41l3b
TU155525 other downstream 933651 16637108 ~ 16639812 (-) True G115312
XR_005640621.1 other upstream 909031 18483156 ~ 18494488 (-) False sppl2
TU156258 other upstream 1142757 18716882 ~ 18718544 (-) True LOC120568909
TU156342 other upstream 1270780 18844905 ~ 18846277 (-) True G115941
TU156358 other upstream 1357849 18931974 ~ 18935477 (-) True LOC120568972
TU156517 other upstream 1647666 19221791 ~ 19222726 (-) True G116084

Expression Profile