RNA id: TU155961


Basic Information

Item Value
RNA id TU155961
length 401
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G115640
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18075068 ~ 18076412 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTAGAGGTTATTGTGTTTGATCCACATAAAACGGACTCCTCCATGGGCCAGGATTGGAGAGAGggtcccctcctcctctttgtcCATCAGAAGGGTCATGAAGTGCTCAATCTCAGACATGTCCACATCCCCCCGGTAATTTCGGCACACCAGGACCTTTCCTTTTAAATCCAAGACATACACTGCACTCGCAGACATCTTGAACTAATTTATACGAGCTTAGTTCAGCTCTTTTTCAGATGCTTATTGATAATGTTTGATATTAACTACTTCAGGgctaaaaataaaagaacagaCTTTCATTCATAATACTGTAAAGAGGAAAGCCACCCTTCCCTTTTTGTCACACTCACACCATCCGTGCATCTAACGAGCGCCCCCTGCGGAACAGGAGGATGTAG

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU155949 lncRNA downstream 16962 18052984 ~ 18058106 (-) True LOC120568693
TU155934 lncRNA downstream 107376 17965813 ~ 17967692 (-) True G115624
TU155864 lncRNA downstream 466811 17607456 ~ 17608257 (-) True G115577
TU155850 lncRNA downstream 500943 17573463 ~ 17574125 (-) True G115570
TU155848 lncRNA downstream 501939 17572897 ~ 17573129 (-) True G115568
TU155962 lncRNA upstream 128 18076540 ~ 18077059 (-) True G115641
TU155965 lncRNA upstream 4786 18081198 ~ 18083844 (-) True G115644
TU156018 lncRNA upstream 156456 18232868 ~ 18234515 (-) True G115691
TU156041 lncRNA upstream 183512 18259924 ~ 18260284 (-) True G115710
XR_005640696.1 lncRNA upstream 193922 18270334 ~ 18286055 (-) True LOC120568297
XM_039816602.1 mRNA downstream 4631 18061303 ~ 18070437 (-) False LOC120568865
XM_039816601.1 mRNA downstream 4635 18060695 ~ 18070433 (-) True LOC120568865
XM_039816600.1 mRNA downstream 9960 18061303 ~ 18065108 (-) False LOC120568865
XM_039816599.1 mRNA downstream 9961 18060695 ~ 18065107 (-) False LOC120568865
XM_039816361.1 mRNA downstream 16909 18054558 ~ 18058159 (-) False LOC120568693
XM_039815684.1 mRNA upstream 74704 18151116 ~ 18170489 (-) False LOC120568287
XM_039815688.1 mRNA upstream 74704 18151116 ~ 18170489 (-) False LOC120568287
XM_039815682.1 mRNA upstream 74704 18151116 ~ 18170489 (-) False LOC120568287
XM_039815683.1 mRNA upstream 74704 18151116 ~ 18170489 (-) True LOC120568287
XM_039815689.1 mRNA upstream 76785 18153197 ~ 18170489 (-) False LOC120568287
TU155671 other downstream 966164 17039800 ~ 17108904 (-) False ly97.3
TU155672 other downstream 1030006 17043126 ~ 17045062 (-) True G115406
TU155670 other downstream 1033592 17039800 ~ 17041476 (-) True ly97.3
XR_005640632.1 other downstream 1272804 16756331 ~ 16802264 (-) False epb41l3b
TU155525 other downstream 1435256 16637108 ~ 16639812 (-) True G115312
XR_005640621.1 other upstream 406744 18483156 ~ 18494488 (-) False sppl2
TU156258 other upstream 640470 18716882 ~ 18718544 (-) True LOC120568909
TU156342 other upstream 768493 18844905 ~ 18846277 (-) True G115941
TU156358 other upstream 855562 18931974 ~ 18935477 (-) True LOC120568972
TU156517 other upstream 1145379 19221791 ~ 19222726 (-) True G116084

Expression Profile