RNA id: TU155962



Basic Information


Item Value
RNA id TU155962
length 238
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G115641
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18076540 ~ 18077059 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gttaaTTGCAATGAGACTACAGCAAAGAGGATACTTACTCCTGCAGAATTTTGCTGTCGGTGGTCTGAGGATAACCGAAGTCCATCAGCTCATCCATCAGCTCGTATATGATGACAAAGTTATCTCTAATGCTCTCTTCCTCCAATTCTTTGAAATACTCTGAAAAAAACCTGGACAATTTTGTACAAGAAGGAGAAGACCAGCGAGACGCTAGCGTTTTTCTTGGATGTTGCGACCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU155961 lncRNA downstream 128 18075068 ~ 18076412 (-) True G115640
TU155949 lncRNA downstream 18434 18052984 ~ 18058106 (-) True LOC120568693
TU155934 lncRNA downstream 108848 17965813 ~ 17967692 (-) True G115624
TU155864 lncRNA downstream 468283 17607456 ~ 17608257 (-) True G115577
TU155850 lncRNA downstream 502415 17573463 ~ 17574125 (-) True G115570
TU155965 lncRNA upstream 4139 18081198 ~ 18083844 (-) True G115644
TU156018 lncRNA upstream 155809 18232868 ~ 18234515 (-) True G115691
TU156041 lncRNA upstream 182865 18259924 ~ 18260284 (-) True G115710
XR_005640696.1 lncRNA upstream 193275 18270334 ~ 18286055 (-) True LOC120568297
TU156057 lncRNA upstream 218503 18295562 ~ 18295788 (-) True G115722
XM_039816602.1 mRNA downstream 6103 18061303 ~ 18070437 (-) False LOC120568865
XM_039816601.1 mRNA downstream 6107 18060695 ~ 18070433 (-) True LOC120568865
XM_039816600.1 mRNA downstream 11432 18061303 ~ 18065108 (-) False LOC120568865
XM_039816599.1 mRNA downstream 11433 18060695 ~ 18065107 (-) False LOC120568865
XM_039816361.1 mRNA downstream 18381 18054558 ~ 18058159 (-) False LOC120568693
XM_039815684.1 mRNA upstream 74057 18151116 ~ 18170489 (-) False LOC120568287
XM_039815688.1 mRNA upstream 74057 18151116 ~ 18170489 (-) False LOC120568287
XM_039815682.1 mRNA upstream 74057 18151116 ~ 18170489 (-) False LOC120568287
XM_039815683.1 mRNA upstream 74057 18151116 ~ 18170489 (-) True LOC120568287
XM_039815689.1 mRNA upstream 76138 18153197 ~ 18170489 (-) False LOC120568287
TU155671 other downstream 967636 17039800 ~ 17108904 (-) False ly97.3
TU155672 other downstream 1031478 17043126 ~ 17045062 (-) True G115406
TU155670 other downstream 1035064 17039800 ~ 17041476 (-) True ly97.3
XR_005640632.1 other downstream 1274276 16756331 ~ 16802264 (-) False epb41l3b
TU155525 other downstream 1436728 16637108 ~ 16639812 (-) True G115312
XR_005640621.1 other upstream 406097 18483156 ~ 18494488 (-) False sppl2
TU156258 other upstream 639823 18716882 ~ 18718544 (-) True LOC120568909
TU156342 other upstream 767846 18844905 ~ 18846277 (-) True G115941
TU156358 other upstream 854915 18931974 ~ 18935477 (-) True LOC120568972
TU156517 other upstream 1144732 19221791 ~ 19222726 (-) True G116084

Expression Profile