RNA id: TU156041



Basic Information


Item Value
RNA id TU156041
length 241
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G115710
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18259924 ~ 18260284 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CCAAATTTGAGGGAATCATGTTTCGATTAGATCTAGAAAGGAATCCACAGGCTGCGCAGCGTCTGCATTACCACTAGAGGACACTGAGGCTGCCTTGGAGGATTTCCCTGGTTGGATCATAACAGCTAAGGCAATGCCAGTGAATGCAGCAATAAGCGTGGTGACCATGTAATAGCTGAAGGCCCTTAGTCCAATTTTCCCATAAGCCTTCCTGTCCACAGATGACAttcctgaaataaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU156018 lncRNA downstream 25409 18232868 ~ 18234515 (-) True G115691
TU155965 lncRNA downstream 176080 18081198 ~ 18083844 (-) True G115644
TU155962 lncRNA downstream 182865 18076540 ~ 18077059 (-) True G115641
TU155961 lncRNA downstream 183512 18075068 ~ 18076412 (-) True G115640
TU155949 lncRNA downstream 201818 18052984 ~ 18058106 (-) True LOC120568693
XR_005640696.1 lncRNA upstream 10050 18270334 ~ 18286055 (-) True LOC120568297
TU156057 lncRNA upstream 35278 18295562 ~ 18295788 (-) True G115722
TU156082 lncRNA upstream 118116 18378400 ~ 18385959 (-) True G115738
TU156134 lncRNA upstream 193749 18454033 ~ 18456002 (-) True G115782
XR_005640793.1 lncRNA upstream 274363 18534647 ~ 18535613 (-) True LOC120568822
XM_039815702.1 mRNA downstream 15666 18236790 ~ 18244258 (-) True LOC120568294
XM_039815691.1 mRNA downstream 84598 18171649 ~ 18175326 (-) True LOC120568289
XM_039815682.1 mRNA downstream 89435 18151116 ~ 18170489 (-) False LOC120568287
XM_039816978.1 mRNA upstream 40128 18300412 ~ 18306617 (-) False LOC120569106
XM_039816977.1 mRNA upstream 40128 18300412 ~ 18306617 (-) True LOC120569106
XM_039814932.1 mRNA upstream 220386 18480670 ~ 18494488 (-) True sppl2
XM_039814933.1 mRNA upstream 222856 18483140 ~ 18494488 (-) False sppl2
XM_039817002.1 mRNA upstream 248171 18508455 ~ 18521023 (-) False phc3
TU155671 other downstream 1151020 17039800 ~ 17108904 (-) False ly97.3
TU155672 other downstream 1214862 17043126 ~ 17045062 (-) True G115406
TU155670 other downstream 1218448 17039800 ~ 17041476 (-) True ly97.3
XR_005640632.1 other downstream 1457660 16756331 ~ 16802264 (-) False epb41l3b
TU155525 other downstream 1620112 16637108 ~ 16639812 (-) True G115312
XR_005640621.1 other upstream 222872 18483156 ~ 18494488 (-) False sppl2
TU156258 other upstream 456598 18716882 ~ 18718544 (-) True LOC120568909
TU156342 other upstream 584621 18844905 ~ 18846277 (-) True G115941
TU156358 other upstream 671690 18931974 ~ 18935477 (-) True LOC120568972
TU156517 other upstream 961507 19221791 ~ 19222726 (-) True G116084

Expression Profile