RNA id: TU156215



Basic Information


Item Value
RNA id TU156215
length 364
lncRNA type inter_gene
GC content 0.60
exon number 2
gene id G115848
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18614801 ~ 18615272 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTGAAGTTGGGTTGGGAAGAATACAGGCTTTGGGTCCGAAGTGAGTGGCTGGATAAGGTCCATGTAGAAAGTGGGCTCTCCTGTGAGGAGAGCTTTCCGCTGTGTCGCTCGTTGAGCCAGAGGGCTCCAAGTGCTCGTGTTGGCCTGGCAACCTCTGCCGCTCGACTTCCCAGTGCAGCTGTTCATGATCACCCCCCCGTCGCTGCGACCTCGTCCCTTTACGCCGTCTCCTTGGTGACTTGGGTGGGTGCTCTCGGGGTTTGGAGGGCCTGGCTGACTCGGACAGCTCACCGGGGGGCGCTGAGGGTCGCACCATATCCTGCACTCCCAGGGGCTCCGATGACAGACTGGTCTTTGAGTTCTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005640793.1 lncRNA downstream 79188 18534647 ~ 18535613 (-) True LOC120568822
TU156134 lncRNA downstream 158799 18454033 ~ 18456002 (-) True G115782
TU156082 lncRNA downstream 228842 18378400 ~ 18385959 (-) True G115738
TU156057 lncRNA downstream 319013 18295562 ~ 18295788 (-) True G115722
XR_005640696.1 lncRNA downstream 328746 18270334 ~ 18286055 (-) True LOC120568297
TU156218 lncRNA upstream 5561 18620833 ~ 18621220 (-) True G115851
XR_005640750.1 lncRNA upstream 47569 18662841 ~ 18663776 (-) True LOC120568692
TU156242 lncRNA upstream 68334 18683606 ~ 18684244 (-) True G115867
TU156247 lncRNA upstream 73957 18689229 ~ 18691179 (-) True G115868
TU156256 lncRNA upstream 87801 18703073 ~ 18720587 (-) False LOC120568909
XM_039816415.1 mRNA downstream 10011 18603307 ~ 18604790 (-) True gpr160
XM_039817002.1 mRNA downstream 93778 18508455 ~ 18521023 (-) False phc3
XM_039817001.1 mRNA downstream 94737 18508455 ~ 18520064 (-) False phc3
XM_039817004.1 mRNA downstream 94737 18508455 ~ 18520064 (-) False phc3
XM_039817003.1 mRNA downstream 94737 18508455 ~ 18520064 (-) False phc3
XM_039815327.1 mRNA upstream 13702 18628974 ~ 18646415 (-) True sec62
XM_039814523.1 mRNA upstream 31809 18647081 ~ 18655196 (-) True samd7
XM_039816654.1 mRNA upstream 87792 18703064 ~ 18720415 (-) False LOC120568909
XM_039816656.1 mRNA upstream 87792 18703064 ~ 18720361 (-) False LOC120568909
XM_039816653.1 mRNA upstream 87792 18703064 ~ 18706049 (-) False LOC120568909
XR_005640621.1 other downstream 120313 18483156 ~ 18494488 (-) False sppl2
TU155671 other downstream 1505897 17039800 ~ 17108904 (-) False ly97.3
TU155672 other downstream 1569739 17043126 ~ 17045062 (-) True G115406
TU155670 other downstream 1573325 17039800 ~ 17041476 (-) True ly97.3
XR_005640632.1 other downstream 1812537 16756331 ~ 16802264 (-) False epb41l3b
TU156258 other upstream 101610 18716882 ~ 18718544 (-) True LOC120568909
TU156342 other upstream 229633 18844905 ~ 18846277 (-) True G115941
TU156358 other upstream 316702 18931974 ~ 18935477 (-) True LOC120568972
TU156517 other upstream 606519 19221791 ~ 19222726 (-) True G116084
TU156578 other upstream 849428 19464700 ~ 19465380 (-) True G116138

Expression Profile