RNA id: TU156218



Basic Information


Item Value
RNA id TU156218
length 219
lncRNA type inter_gene
GC content 0.55
exon number 2
gene id G115851
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18620833 ~ 18621220 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTGTAGCTGCAGGGTGACCTTGCCGGCCTCGCTGTTGGTGTGTCCATGAGGAAGGAGTCCGTTGTGttcctgctgcagctgctgtggcTCTCTGCTGTACGACTCCTGGCCTGTTCTCTGAAGCATGTCCTTCACCACCTTCACCTTAAGACGACTGCGCAGAGTGATGGCTGCATTGCCTTCAAACACTTTGGCCACTTCGGTCTTGTATGACTCAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU156215 lncRNA downstream 5561 18614801 ~ 18615272 (-) True G115848
XR_005640793.1 lncRNA downstream 85220 18534647 ~ 18535613 (-) True LOC120568822
TU156134 lncRNA downstream 164831 18454033 ~ 18456002 (-) True G115782
TU156082 lncRNA downstream 234874 18378400 ~ 18385959 (-) True G115738
TU156057 lncRNA downstream 325045 18295562 ~ 18295788 (-) True G115722
XR_005640750.1 lncRNA upstream 41621 18662841 ~ 18663776 (-) True LOC120568692
TU156242 lncRNA upstream 62386 18683606 ~ 18684244 (-) True G115867
TU156247 lncRNA upstream 68009 18689229 ~ 18691179 (-) True G115868
TU156256 lncRNA upstream 81853 18703073 ~ 18720587 (-) False LOC120568909
TU156304 lncRNA upstream 213304 18834524 ~ 18834763 (-) True G115917
XM_039816415.1 mRNA downstream 16043 18603307 ~ 18604790 (-) True gpr160
XM_039817001.1 mRNA downstream 100769 18508455 ~ 18520064 (-) False phc3
XM_039815327.1 mRNA upstream 7754 18628974 ~ 18646415 (-) True sec62
XM_039814523.1 mRNA upstream 25861 18647081 ~ 18655196 (-) True samd7
XM_039816654.1 mRNA upstream 81844 18703064 ~ 18720415 (-) False LOC120568909
XM_039816656.1 mRNA upstream 81844 18703064 ~ 18720361 (-) False LOC120568909
XM_039816653.1 mRNA upstream 81844 18703064 ~ 18706049 (-) False LOC120568909
XR_005640621.1 other downstream 126345 18483156 ~ 18494488 (-) False sppl2
TU155671 other downstream 1511929 17039800 ~ 17108904 (-) False ly97.3
TU155672 other downstream 1575771 17043126 ~ 17045062 (-) True G115406
TU155670 other downstream 1579357 17039800 ~ 17041476 (-) True ly97.3
XR_005640632.1 other downstream 1818569 16756331 ~ 16802264 (-) False epb41l3b
TU156258 other upstream 95662 18716882 ~ 18718544 (-) True LOC120568909
TU156342 other upstream 223685 18844905 ~ 18846277 (-) True G115941
TU156358 other upstream 310754 18931974 ~ 18935477 (-) True LOC120568972
TU156517 other upstream 600571 19221791 ~ 19222726 (-) True G116084
TU156578 other upstream 843480 19464700 ~ 19465380 (-) True G116138

Expression Profile