RNA id: TU157004



Basic Information


Item Value
RNA id TU157004
length 547
lncRNA type inter_gene
GC content 0.49
exon number 3
gene id G116484
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 20768635 ~ 20771028 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CCCTCATCTGTCCCTCGTTGCCTCTGTATTGTTTGGTCAGCTGTGCCAGCTGGAACTCCAGCGAGCGTTTACTCTCTAGTGCTGTGTTGATCTCCTGTTTGAGCTGCTTCTCTGAACACCTAAGACGGTCCACCTCCTGCGTGCGGCTCTTCAGGTCGTTCTGAGACTGGACACGCTTGCTCGACTCCTGTTCTCCCTGTATCCGCAGATTCTTCACCTCATCTTCCAGCCTCTCTTTTTGCTTCATCAGCTGCTCCATCTTCTGCACCGACTGCTTGAGGTCAAACTCTAACATCGAGCACTGCTTCTCAACCTCCACTACCCGGCTCTCCGCTCGCATCCTCGCGCCGTTCTCCTCCGACATCTTCTGCTGAACAGCTGGAGTAGAACAGTGACGGGAAAACAATCACTTCCTTGTCGGCAATTTATTTAGTTTCAAATTCGATTGATTTTTTTGTTCTACTGCCAACTGATGTGAGAATATCAACTTGGTAACCCTGAACTCACACTGAACAATCCATCTGTGCGATATGTAACAATTCTAAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005640772.1 lncRNA downstream 182958 20580520 ~ 20585677 (-) True LOC120568747
TU156870 lncRNA downstream 376915 20390357 ~ 20391720 (-) True G116368
TU156868 lncRNA downstream 380573 20387498 ~ 20388062 (-) True G116366
TU156823 lncRNA downstream 442761 20325649 ~ 20325874 (-) True G116328
TU156782 lncRNA downstream 831222 19924212 ~ 19937413 (-) True G116292
TU157021 lncRNA upstream 35125 20806153 ~ 20806691 (-) True G116499
TU157030 lncRNA upstream 56484 20827512 ~ 20827711 (-) True G116508
TU157050 lncRNA upstream 147941 20918969 ~ 20919716 (-) True G116525
TU157105 lncRNA upstream 217296 20988324 ~ 20995540 (-) True tmie
TU157133 lncRNA upstream 287564 21058592 ~ 21061240 (-) True G116580
XM_039816202.1 mRNA downstream 28606 20693367 ~ 20740029 (-) False greb1l
XM_039816201.1 mRNA downstream 28606 20693367 ~ 20740029 (-) False greb1l
XM_039816200.1 mRNA downstream 28606 20693367 ~ 20740029 (-) False greb1l
XM_039816199.1 mRNA downstream 28606 20693367 ~ 20740029 (-) False greb1l
XM_039816197.1 mRNA downstream 28606 20693367 ~ 20740029 (-) False greb1l
XM_039814886.1 mRNA upstream 21716 20792744 ~ 20799545 (-) True thoc1
XM_039816821.1 mRNA upstream 44621 20815649 ~ 20818164 (-) True LOC120569019
XM_039816986.1 mRNA upstream 149568 20920596 ~ 20923664 (-) False myl13
XM_039816985.1 mRNA upstream 149568 20920596 ~ 20923664 (-) True myl13
XM_039816213.1 mRNA upstream 213773 20984801 ~ 20995567 (-) False tmie
TU156767 other downstream 972926 19793834 ~ 19795709 (-) False xcr1b.1
TU156578 other downstream 1303255 19464700 ~ 19465380 (-) True G116138
TU156517 other downstream 1545909 19221791 ~ 19222726 (-) True G116084
TU156358 other downstream 1833158 18931974 ~ 18935477 (-) True LOC120568972
TU156342 other downstream 1922358 18844905 ~ 18846277 (-) True G115941
TU157096 other upstream 237021 21008049 ~ 21010569 (-) False higd1a
TU157655 other upstream 1490970 22261998 ~ 22263498 (-) False G116969
TU157659 other upstream 1492095 22263123 ~ 22268559 (-) True G116969
TU158039 other upstream 2659338 23430366 ~ 23430992 (-) True G117259
XR_005640657.1 other upstream 2697592 23468620 ~ 23491612 (-) False LOC120568062

Expression Profile