Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU157612 |
| length | 1112 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | LOC120568856 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 22234819 ~ 22238505 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005640669.1 | lncRNA | upstream | 197869 | 22025113 ~ 22036950 (+) | False | LOC120568180 |
| XR_005640667.1 | lncRNA | upstream | 199078 | 22025113 ~ 22035741 (+) | True | LOC120568180 |
| XR_005640668.1 | lncRNA | upstream | 199078 | 22025113 ~ 22035741 (+) | False | LOC120568180 |
| TU157508 | lncRNA | upstream | 214541 | 21935519 ~ 22020278 (+) | True | G116857 |
| TU157416 | lncRNA | upstream | 396067 | 21834466 ~ 21838752 (+) | True | G116794 |
| XR_005640771.1 | lncRNA | downstream | 71168 | 22307767 ~ 22314947 (+) | True | LOC120568744 |
| TU157668 | lncRNA | downstream | 228736 | 22465335 ~ 22472840 (+) | True | G116978 |
| TU157787 | lncRNA | downstream | 510521 | 22747120 ~ 22747732 (+) | True | G117077 |
| TU157795 | lncRNA | downstream | 515653 | 22752252 ~ 22754490 (+) | True | G117082 |
| TU157860 | lncRNA | downstream | 681277 | 22917876 ~ 22918106 (+) | True | G117128 |
| XM_039816575.1 | mRNA | upstream | 8693 | 22220708 ~ 22226126 (+) | True | LOC120568851 |
| XM_039816573.1 | mRNA | upstream | 24081 | 22204495 ~ 22210738 (+) | True | gpaa1 |
| XM_039816586.1 | mRNA | upstream | 30626 | 22201552 ~ 22204193 (+) | True | exosc4 |
| XM_039816581.1 | mRNA | upstream | 34171 | 22189167 ~ 22200648 (+) | False | prkacbb |
| XM_039816582.1 | mRNA | upstream | 34171 | 22189167 ~ 22200648 (+) | False | prkacbb |
| XM_039816503.1 | mRNA | downstream | 20609 | 22257208 ~ 22268559 (+) | True | LOC120568797 |
| XM_039814973.1 | mRNA | downstream | 251238 | 22487837 ~ 22495325 (+) | True | ripk1l |
| XM_039814975.1 | mRNA | downstream | 279679 | 22516278 ~ 22524115 (+) | True | mep1bb |
| XM_039815106.1 | mRNA | downstream | 371450 | 22608049 ~ 22614189 (+) | True | LOC120567968 |
| XM_039815107.1 | mRNA | downstream | 371456 | 22608055 ~ 22620131 (+) | False | LOC120567968 |
| XR_005640709.1 | other | upstream | 337428 | 21870953 ~ 21897391 (+) | False | LOC120568354 |
| TU157037 | other | upstream | 1319531 | 20882706 ~ 20915288 (+) | False | LOC120568904 |
| XR_005640618.1 | other | upstream | 1859186 | 20373235 ~ 20375633 (+) | True | LOC120567833 |
| unassigned_transcript_559 | other | upstream | 2717874 | 19516853 ~ 19516945 (+) | True | trnar-ucu_13 |
| TU156400 | other | upstream | 3216093 | 19017058 ~ 19018726 (+) | False | LOC120568770 |
| TU157733 | other | downstream | 371465 | 22608064 ~ 22612409 (+) | False | LOC120567968 |
| XR_005640697.1 | other | downstream | 404911 | 22641510 ~ 22678731 (+) | False | LOC120568311 |
| TU158062 | other | downstream | 1440480 | 23677079 ~ 23685804 (+) | True | LOC120567964 |
| TU158130 | other | downstream | 1614280 | 23850879 ~ 23855157 (+) | True | G117319 |
| unassigned_transcript_561 | other | downstream | 1631655 | 23868254 ~ 23868325 (+) | True | trnaw-cca_13 |
