Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005640814.1 |
| length | 891 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 3 |
| gene id | LOC120568967 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 25989412 ~ 25992209 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU158926 | lncRNA | downstream | 50947 | 25937605 ~ 25938510 (-) | True | G117890 |
| TU158909 | lncRNA | downstream | 117204 | 25871325 ~ 25872253 (-) | True | G117875 |
| XR_005640802.1 | lncRNA | downstream | 159593 | 25828793 ~ 25829864 (-) | True | LOC120568899 |
| TU158799 | lncRNA | downstream | 394700 | 25594273 ~ 25594757 (-) | True | G117813 |
| TU158798 | lncRNA | downstream | 395872 | 25593043 ~ 25593585 (-) | True | G117812 |
| TU158939 | lncRNA | upstream | 56721 | 26048930 ~ 26051078 (-) | True | G117899 |
| XR_005640606.1 | lncRNA | upstream | 72380 | 26064589 ~ 26086344 (-) | True | LOC120567720 |
| XR_005640605.1 | lncRNA | upstream | 72380 | 26064589 ~ 26065894 (-) | False | LOC120567720 |
| TU159011 | lncRNA | upstream | 105384 | 26097593 ~ 26102089 (-) | True | G117957 |
| TU159050 | lncRNA | upstream | 200798 | 26193007 ~ 26194884 (-) | True | G117993 |
| XM_039816737.1 | mRNA | downstream | 510 | 25972731 ~ 25988947 (-) | True | LOC120568966 |
| XM_039816736.1 | mRNA | downstream | 21037 | 25963373 ~ 25968420 (-) | False | LOC120568965 |
| XM_039816735.1 | mRNA | downstream | 21037 | 25963373 ~ 25968420 (-) | True | LOC120568965 |
| XM_039816729.1 | mRNA | downstream | 71684 | 25895638 ~ 25917773 (-) | True | pax3a |
| XM_039815592.1 | mRNA | downstream | 858897 | 25114378 ~ 25130560 (-) | False | LOC120568225 |
| XM_039814882.1 | mRNA | upstream | 59890 | 26052099 ~ 26058572 (-) | False | LOC120567824 |
| XM_039814881.1 | mRNA | upstream | 65099 | 26057308 ~ 26058572 (-) | True | LOC120567824 |
| XM_039815723.1 | mRNA | upstream | 203634 | 26195843 ~ 26203560 (-) | True | map6d1 |
| XM_039816630.1 | mRNA | upstream | 323561 | 26315770 ~ 26319595 (-) | True | camk2n1a |
| XM_039816117.1 | mRNA | upstream | 333279 | 26325488 ~ 26330262 (-) | True | mul1a |
| TU158687 | other | downstream | 1066139 | 24922203 ~ 24923318 (-) | True | G117732 |
| TU158445 | other | downstream | 1452961 | 24499380 ~ 24536496 (-) | True | G117560 |
| XR_005640841.1 | other | downstream | 1967956 | 24021439 ~ 24021501 (-) | True | LOC120569138 |
| XR_005640840.1 | other | downstream | 1969019 | 24020362 ~ 24020438 (-) | True | LOC120569137 |
| unassigned_transcript_562 | other | downstream | 2120231 | 23869155 ~ 23869226 (-) | True | trnap-agg_8 |
| TU159298 | other | upstream | 669412 | 26661621 ~ 26665952 (-) | True | G118175 |
| XR_005640672.1 | other | upstream | 827629 | 26819838 ~ 26824570 (-) | False | cirbpa |
| TU159721 | other | upstream | 1678767 | 27670976 ~ 27675360 (-) | False | LOC120568986 |
| TU159739 | other | upstream | 1721258 | 27713467 ~ 27714390 (-) | False | G118524 |
| TU159738 | other | upstream | 1725342 | 27717551 ~ 27718759 (-) | True | G118524 |
