RNA id: XM_039815275.1


Basic Information

Item Value
RNA id XM_039815275.1
length 1833
RNA type mRNA
GC content 0.46
exon number 10
gene id metap1d
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 28146271 ~ 28152770 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCACGTGACTTCCAATCCACACCACGTGACCACCAATACAACTCCATGGCGGCGCACTGTTCTGTAGGACTTGCAACAAGATCAGGACTGGGTGGTTTCCTGCGaagagtttgttttttaagaagCTGTGGCCCCCCCACAGCCGTACTGTGTCAGCAACATCGCCGCTTCTTTTGGAGGAAGTGGAAAAGTTGTCACAGTGTAGTTCGCCCAGCTACTGTCAGACCTGCTTATGCAGTACCCAAGCACATTGTGCGGCCTGACTATGTAGGCGACCGGCTGATCCCAGAATGGCCAGACTACATAGAGATCAAAGACCAAGAGCAGATCCAAGGCCTTGccagagcatgtcagctagccaGACATGTGCTGCTACTAGCTGGACGCAGTCTGAAGGTAGGTATGACAACCGATGAAATAGACTTTATCGTGCACCAGGAGACAATCAAGCACAACGCATACCCATCCCCTCTCAGATACGGGGGTTTCCCCAAGTCAGTCTGTACATCTGTGAACAACGTGGTCTGCCACGGCATACCTGACAGTCGGCAACTTCAGGACGGAGATATCATCAACGTTGATGTCACTGTGTATTTGGATGGTTACCATGGCGACACCTCAGAGACCTTCTTGATTGGCCAGGTGGATGAGGTTGGGCAGCGATTGGTAGAAGCAGCCAGGCGCTGCCGAGATGAGGCCATCGCTGCCTGCAAGCCGGGTGCACCGCTCTGTGTAATAGGAAACACtatcagTGAAGTTGCTCACGCCAGTGGCTTCCAGGTGTGTCCCTATTTCATTGGACATGGGATAGGTTCCTACTTTCACTGCCATCCTGAGATCTGGCATCATGCTAATGACAATGGCTTGACCATGGACGAAGGGATGTCTTTCACAATAGagcccatACTGATGGAGGGGTCTGCAGAGTTTAGAATCCTGAAGGACAAGTGGACCGCAGTGTCTGCAGACGATAAAAGGTCGGCTCAGTTTGAACACACGGTGGTCATCACACCTGACGGAGTGGATATTCTCACCAAACTGCCAGAAGAGAGCAATCTGCGACCTGAAGGAAATCTAACGGCTGACCCCCACATCAACTGTTAGAAGGCTCTTTACCTCAAAAAGGATCTAAACTACCAGAGATACCAAAACATTGTTACAAGAACTTGAATGGTGATTCACCGAGACACAACACGTGTGTAATTCCTAGATGTAAAGTGAAatggaaatacattttcttaTTTTGCTTATAAATATTAACTAGGGATTACACAGACATTGTCTATTGTATATTCAGTTTGACTGAGGTGTTTTTTCACCCTTGATTGAAACATACAGAAAAAAAGTGGCTGCTGGTATCTAAATGCTTGAATAATTAAGTAGAGATCTATGCATGCAATGAGTGTTTCTATTGTCATTATAGGAGAGCCCAATCTTCTCCAAATTTCAGTCTGTTCTTTCCCTAACCCATCAGCAGCTGACCATTTTTAGCcagtttaaagttttttttgagCGAACACTCAGATTTGTGTGATCCTTTATGACAGCTAGTTAGTTCAATGGGGCCCCACGAAGTTAAATGTAGTGTGTGACATTCGAGTGGGACTTGAAACAGTTAAATGGAAGCAACACGAGTCGGGCCTCGGCCAGGATTTTAGAAATACCGAGTCATCACGAGTCCAAATTCCCCTAGCACAACCCCATCCACCTACAGTAAAAATTAAACACTTGCCATCAACCAAAAACTATGAAATCAGAATTATTTCACTTGTATGTATTAAATTTGctgtttgattttattttctgtaataTATTTCTCACTTCATCATTGTC

Function

GO: NA

KEGG:

id description
K01265 map; methionyl aminopeptidase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU159885 lncRNA downstream 1237 28144428 ~ 28145034 (-) True G118613
TU159867 lncRNA downstream 46461 28095023 ~ 28099810 (-) True G118608
TU159713 lncRNA downstream 481559 27627886 ~ 27664712 (-) True G118504
TU159682 lncRNA downstream 536577 27597991 ~ 27609694 (-) False G118482
TU159912 lncRNA upstream 47367 28200137 ~ 28200551 (-) True G118632
TU159916 lncRNA upstream 52941 28205711 ~ 28206241 (-) True G118636
TU159956 lncRNA upstream 318197 28470967 ~ 28473620 (-) True G118668
TU159959 lncRNA upstream 328869 28481639 ~ 28481897 (-) True G118671
TU159970 lncRNA upstream 503891 28656661 ~ 28657022 (-) True G118678
XM_039814619.1 mRNA downstream 12067 28104455 ~ 28134204 (-) True LOC120567660
XM_039814615.1 mRNA downstream 68756 28042117 ~ 28077515 (-) True LOC120567656
XM_039814614.1 mRNA downstream 68756 28044938 ~ 28077515 (-) False LOC120567656
XM_039814616.1 mRNA downstream 84970 28044938 ~ 28061301 (-) False LOC120567656
XM_039814617.1 mRNA downstream 104312 28028019 ~ 28041959 (-) True LOC120567657
XM_039815280.1 mRNA upstream 17190 28169960 ~ 28185339 (-) False LOC120568081
XM_039815278.1 mRNA upstream 17190 28169960 ~ 28185339 (-) False LOC120568081
XM_039815279.1 mRNA upstream 17190 28169960 ~ 28185339 (-) False LOC120568081
XM_039815277.1 mRNA upstream 17190 28169960 ~ 28185339 (-) True LOC120568081
XM_039815284.1 mRNA upstream 33189 28185959 ~ 28188829 (-) True LOC120568084
TU159738 other downstream 427512 27717551 ~ 27718759 (-) True G118524
TU159739 other downstream 431881 27713467 ~ 27714390 (-) False G118524
TU159721 other downstream 470911 27670976 ~ 27675360 (-) False LOC120568986
XR_005640672.1 other downstream 1321701 26819838 ~ 26824570 (-) False cirbpa
TU159298 other downstream 1480319 26661621 ~ 26665952 (-) True G118175
TU160079 other upstream 833321 28986091 ~ 28986319 (-) True G118764
TU160179 other upstream 1267609 29420379 ~ 29420652 (-) True G118856
TU160248 other upstream 1491593 29644363 ~ 29649792 (-) False LOC120567741
TU160542 other upstream 2711476 30864246 ~ 30865494 (-) False LOC120568929
TU160545 other upstream 2711476 30864246 ~ 30876080 (-) True LOC120568929

Expression Profile