RNA id: TU160301



Basic Information


Item Value
RNA id TU160301
length 201
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G118959
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 30015553 ~ 30015753 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agtttttttgttcttttgtatGTGAACATTTACAGCCAGCCACCTAGTGGATTGTTTTGGCATGTTTTCATGTGGTAACTCACCATGTCATTCAGGTGTTTTCCAATTAGCCTACACAAAAGGGGGAATTGTTTGTCTGGGCCACTACGCATGGGTTGCTTCTCCCTAtgtcttttacattttctattATGAAATAGCCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU160294 lncRNA downstream 47333 29968014 ~ 29968220 (-) True G118952
TU160292 lncRNA downstream 48810 29966527 ~ 29966743 (-) True G118950
TU160282 lncRNA downstream 176933 29838211 ~ 29838620 (-) True G118940
XR_005640609.1 lncRNA downstream 218648 29782107 ~ 29796905 (-) True LOC120567751
TU160274 lncRNA downstream 263493 29751841 ~ 29752060 (-) True G118933
TU160303 lncRNA upstream 24814 30040567 ~ 30040826 (-) True G118961
TU160308 lncRNA upstream 69563 30085316 ~ 30085575 (-) True G118966
XR_005640761.1 lncRNA upstream 128291 30144044 ~ 30149629 (-) False LOC120568731
XR_005640762.1 lncRNA upstream 128291 30144044 ~ 30149629 (-) False LOC120568731
XR_005640760.1 lncRNA upstream 128291 30144044 ~ 30149629 (-) True LOC120568731
XM_039814658.1 mRNA downstream 41264 29970090 ~ 29974289 (-) True LOC120567690
XM_039814654.1 mRNA downstream 325218 29685050 ~ 29690335 (-) True LOC120567685
XM_039814720.1 mRNA downstream 365861 29636103 ~ 29649692 (-) False LOC120567741
XM_039816749.1 mRNA upstream 304199 30319952 ~ 30438652 (-) False LOC120568974
XM_039816748.1 mRNA upstream 304199 30319952 ~ 30438652 (-) True LOC120568974
XM_039816750.1 mRNA upstream 339121 30354874 ~ 30438652 (-) False LOC120568974
XM_039815957.1 mRNA upstream 426632 30442385 ~ 30477185 (-) False LOC120568429
XM_039816284.1 mRNA upstream 466835 30482588 ~ 30524862 (-) True LOC120568640
TU160248 other downstream 365761 29644363 ~ 29649792 (-) False LOC120567741
TU160179 other downstream 594901 29420379 ~ 29420652 (-) True G118856
TU160079 other downstream 1029234 28986091 ~ 28986319 (-) True G118764
TU159738 other downstream 2296794 27717551 ~ 27718759 (-) True G118524
TU159739 other downstream 2301163 27713467 ~ 27714390 (-) False G118524
TU160542 other upstream 848493 30864246 ~ 30865494 (-) False LOC120568929
TU160545 other upstream 848493 30864246 ~ 30876080 (-) True LOC120568929
TU160586 other upstream 1110677 31126430 ~ 31174951 (-) True G119177
TU160575 other upstream 1154169 31169922 ~ 31171610 (-) True G119169
TU160576 other upstream 1154629 31170382 ~ 31171610 (-) False G119169

Expression Profile