RNA id: TU160363



Basic Information


Item Value
RNA id TU160363
length 214
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G119012
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 30274707 ~ 30275347 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTTTATTCTAGAGACGTCAGATTTATCGGGTGGCTGCAATTAGAAGAAAGGACTTTTCTTTTGACCTAATCTCCCAGTCGATGGGAGTGTGTTCTCTGCATATTTATTCGGggacTAAGGAACAAACGGAGGCTGCACTAGCATCACCagaagggagagatgaggagtaGAGGGAAAGCAAAATATGTTGAATAGATTATTTGCTATATTAGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU160334 lncRNA downstream 54605 30219713 ~ 30220102 (-) True G118990
XR_005640761.1 lncRNA downstream 125078 30144044 ~ 30149629 (-) False LOC120568731
XR_005640762.1 lncRNA downstream 125078 30144044 ~ 30149629 (-) False LOC120568731
XR_005640760.1 lncRNA downstream 125078 30144044 ~ 30149629 (-) True LOC120568731
TU160308 lncRNA downstream 189132 30085316 ~ 30085575 (-) True G118966
TU160366 lncRNA upstream 40749 30316096 ~ 30319838 (-) True G119014
TU160405 lncRNA upstream 165542 30440889 ~ 30448161 (-) True LOC120568429
TU160451 lncRNA upstream 519620 30794967 ~ 30795784 (-) True G119073
XR_005640806.1 lncRNA upstream 589560 30864907 ~ 30876111 (-) False LOC120568929
TU160580 lncRNA upstream 902040 31177387 ~ 31197976 (-) True G119171
XM_039814658.1 mRNA downstream 300418 29970090 ~ 29974289 (-) True LOC120567690
XM_039814654.1 mRNA downstream 584372 29685050 ~ 29690335 (-) True LOC120567685
XM_039814718.1 mRNA downstream 625015 29636103 ~ 29649692 (-) False LOC120567741
XM_039816749.1 mRNA upstream 44605 30319952 ~ 30438652 (-) False LOC120568974
XM_039816748.1 mRNA upstream 44605 30319952 ~ 30438652 (-) True LOC120568974
XM_039816750.1 mRNA upstream 79527 30354874 ~ 30438652 (-) False LOC120568974
XM_039815957.1 mRNA upstream 167038 30442385 ~ 30477185 (-) False LOC120568429
XM_039816284.1 mRNA upstream 207241 30482588 ~ 30524862 (-) True LOC120568640
TU160248 other downstream 624915 29644363 ~ 29649792 (-) False LOC120567741
TU160179 other downstream 854055 29420379 ~ 29420652 (-) True G118856
TU160079 other downstream 1288388 28986091 ~ 28986319 (-) True G118764
TU159738 other downstream 2555948 27717551 ~ 27718759 (-) True G118524
TU159739 other downstream 2560317 27713467 ~ 27714390 (-) False G118524
TU160542 other upstream 588899 30864246 ~ 30865494 (-) False LOC120568929
TU160545 other upstream 588899 30864246 ~ 30876080 (-) True LOC120568929
TU160586 other upstream 851083 31126430 ~ 31174951 (-) True G119177
TU160575 other upstream 894575 31169922 ~ 31171610 (-) True G119169
TU160576 other upstream 895035 31170382 ~ 31171610 (-) False G119169

Expression Profile