RNA id: TU160579



Basic Information


Item Value
RNA id TU160579
length 243
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G119171
representative False

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 31177387 ~ 31197976 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agagacagagagagatggagggagaaggagggatggagagagaacagagagagggagggagaaggagggatggagagaggacagagagagagaaaagagaaagaaacagggagagagagagaaagaaaagagaaacagagagatagagagggagggagaaggcggaatggagaaaggagagagagagaaagagagagagacagagagagagagggagggatggagagaggacagagagagagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005640806.1 lncRNA downstream 306731 30864907 ~ 30876111 (-) False LOC120568929
TU160451 lncRNA downstream 387058 30794967 ~ 30795784 (-) True G119073
TU160405 lncRNA downstream 734681 30440889 ~ 30448161 (-) True LOC120568429
TU160366 lncRNA downstream 863004 30316096 ~ 30319838 (-) True G119014
TU160363 lncRNA downstream 907495 30274707 ~ 30275347 (-) True G119012
TU160585 lncRNA upstream 4566 31202542 ~ 31203107 (-) True G119176
TU160582 lncRNA upstream 29131 31227107 ~ 31235412 (-) True G119173
TU160618 lncRNA upstream 82346 31280322 ~ 31282095 (-) True G119204
TU160631 lncRNA upstream 151734 31349710 ~ 31349984 (-) True G119216
TU160646 lncRNA upstream 179364 31377340 ~ 31377550 (-) True G119231
XM_039816680.1 mRNA downstream 27117 31049685 ~ 31155725 (-) False LOC120568925
XM_039816681.1 mRNA downstream 27118 31040284 ~ 31155724 (-) False LOC120568925
XM_039816679.1 mRNA downstream 27119 31040284 ~ 31155723 (-) True LOC120568925
XM_039814580.1 mRNA downstream 456762 30717405 ~ 30726080 (-) True LOC120567647
XM_039816285.1 mRNA downstream 657980 30495042 ~ 30524862 (-) False LOC120568640
XM_039816682.1 mRNA upstream 2565 31200541 ~ 31202192 (-) True LOC120568926
XM_039816425.1 mRNA upstream 257623 31455599 ~ 31457157 (-) True LOC120568745
XM_039815925.1 mRNA upstream 271619 31469595 ~ 31575193 (-) False zeb1a
XM_039815926.1 mRNA upstream 271619 31469595 ~ 31573690 (-) True zeb1a
XM_039816310.1 mRNA upstream 484224 31682200 ~ 31692546 (-) True LOC120568656
TU160586 other downstream 7891 31126430 ~ 31174951 (-) True G119177
TU160575 other downstream 11232 31169922 ~ 31171610 (-) True G119169
TU160576 other downstream 11232 31170382 ~ 31171610 (-) False G119169
TU160545 other downstream 306762 30864246 ~ 30876080 (-) True LOC120568929
TU160542 other downstream 317348 30864246 ~ 30865494 (-) False LOC120568929
TU160692 other upstream 292276 31490252 ~ 31575190 (-) False zeb1a
TU160835 other upstream 849501 32047477 ~ 32051439 (-) True G119379
TU160944 other upstream 1018526 32216502 ~ 32226360 (-) False G119465
TU160945 other upstream 1020531 32218507 ~ 32226360 (-) True G119465
TU161095 other upstream 1564369 32762345 ~ 32765076 (-) False fcer1gl

Expression Profile